Xanthomonas campestris pv. vesicatoria str. 85-10, 85-10 | |
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Genomic elements | 1 chromosomes(s), 4 circular plasmid(s) Show details |
Genome features | CDS: 4726 genes, length ø 1001 bp, gc-content ø 0.644 '+'-strand: 2346 genes, length ø 991 bp, gc-content ø 0.643 '-'-strand: 2380 genes, length ø 1010 bp, gc-content ø 0.645 misc_feature: 68 genes, length ø 1173 bp, gc-content ø 0.615 '+'-strand: 40 genes, length ø 1181 bp, gc-content ø 0.616 '-'-strand: 28 genes, length ø 1161 bp, gc-content ø 0.615 operon: 2 genes, length ø 6033 bp, gc-content ø 0.541 '+'-strand: 0 genes, length ø 0 bp, gc-content ø 0 '-'-strand: 2 genes, length ø 6033 bp, gc-content ø 0.541 rRNA: 4 genes, length ø 2221 bp, gc-content ø 0.542 '+'-strand: 0 genes, length ø 0 bp, gc-content ø 0 '-'-strand: 4 genes, length ø 2221 bp, gc-content ø 0.542 sig_peptide: 737 genes, length ø 80 bp, gc-content ø 0.641 '+'-strand: 382 genes, length ø 79 bp, gc-content ø 0.638 '-'-strand: 355 genes, length ø 81 bp, gc-content ø 0.645 tRNA: 56 genes, length ø 79 bp, gc-content ø 0.608 '+'-strand: 28 genes, length ø 78 bp, gc-content ø 0.601 '-'-strand: 28 genes, length ø 79 bp, gc-content ø 0.616 |
COG categories | |
Amino acid transport and metabolism [E] | 295 |
Carbohydrate transport and metabolism [G] | 251 |
Cell cycle control, mitosis and meiosis [D] | 45 |
Cell motility [N] | 142 |
Cell wall/membrane biogenesis [M] | 258 |
Chromatin structure and dynamics [B] | 1 |
Coenzyme transport and metabolism [H] | 125 |
Cytoskeleton [Z] | 2 |
Defense mechanisms [V] | 61 |
Energy production and conversion [C] | 221 |
Extracellular structures [W] | 3 |
Function unknown [S] | 335 |
General function prediction only [R] | 516 |
Inorganic ion transport and metabolism [P] | 259 |
Intracellular trafficking and secretion [U] | 152 |
Lipid transport and metabolism [I] | 162 |
NOT ANALYZED | 867 |
Nuclear structure [Y] | 0 |
Nucleotide transport and metabolism [F] | 61 |
Posttranslational modification, protein turnover, chaperones [O] | 182 |
RNA processing and modification [A] | 1 |
Replication, recombination and repair [L] | 347 |
Secondary metabolites biosynthesis, transport and catabolism [Q] | 101 |
Signal transduction mechanisms [T] | 280 |
Transcription [K] | 284 |
Translation, ribosomal structure and biogenesis [J] | 189 |
Unclassified [-] | 1088 |