Sequence similarity search
 
Perform a BLASTN sequence comparison of your DNA sequence against a nucleotide sequence database (genomic DNA or genes) or a BLASTP sequence comparison of your protein sequence against all protein sequences of the browser genomes.

Please paste your sequence into the text field. Allowed sequence formats: GenBank, EMBL, Fasta and raw.
...or retrieve query sequence segment from genomic element
Xanthomonas axonopodis pv. citri str. 306: chromosome (5175554 bp) Xanthomonas axonopodis pv. citri str. 306: pXAC33 (33700 bp) Xanthomonas axonopodis pv. citri str. 306: pXAC64 (64920 bp) Xanthomonas campestris pv. campestris str. 8004: chromosome (5148708 bp) Xanthomonas campestris pv. campestris str. ATCC 33913: chromosome (5076188 bp) Xanthomonas campestris pv. vesicatoria str. 85-10: chromosome (5178466 bp) Xanthomonas campestris pv. vesicatoria str. 85-10: pXCV183 (182572 bp) Xanthomonas campestris pv. vesicatoria str. 85-10: pXCV19 (19146 bp) Xanthomonas campestris pv. vesicatoria str. 85-10: pXCV2 (1852 bp) Xanthomonas campestris pv. vesicatoria str. 85-10: pXCV38 (38116 bp) Xanthomonas oryzae pv. oryzae KACC10331: chromosome (4941439 bp) Xylella fastidiosa: pXF868 (1296 bp) Xylella fastidiosa 9a5c: chromosome (2679306 bp) Xylella fastidiosa 9a5c: pXF1.3 (1286 bp) Xylella fastidiosa 9a5c: pXF51 (51158 bp) Xylella fastidiosa Temecula1: chromosome (2519802 bp) Xylella fastidiosa Temecula1: pXFPD1.3 (1346 bp)
From:
To:
Select database to search against:
XGB genomic sequence(s) (DNA database)XGB genes (DNA database)XGB proteins
Optional parameters:
Expect: 11e-11e-51e-101e-501e-100
Low complexity filter: noyes