Home
Genomes
+
Xanthomonas axonopodis pv. citri str. 306, 306
+
Xanthomonas campestris pv. campestris str. 8004, 8004
+
Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913
+
Xanthomonas campestris pv. vesicatoria str. 85-10, 85-10
+
Xanthomonas oryzae pv. oryzae KACC10331, KACC10331
+
Xylella fastidiosa 9a5c
+
Xylella fastidiosa Temecula1, Temecula1
+
Xylella fastidiosa, ATTC 35868
Methods
+
Gene lists
+
COG functional categories
+
(Clickable) linear whole genome views
+
Genome plots
+
Genome lists
+
Horizontal gene transfer (predicted by SIGI-HMM)
+
Sequence retrieval
+
Advanced search
+
Sequence similarity search
+
Best bidirectional hits (protein-based analysis)
+
Gene core sets (protein-based analysis)
+
Gene partnerships (DNA-based analysis)
+
Protein variations (protein-based analysis)
+
Synteny analysis (protein-based analysis)
+
Gene conservation (protein-based analysis)
+
Codon and amino acid usages (DNA- and protein-based analysis)
Documentation
Contact
Leibniz FLI
QuickSearch
Perfect match
2024-04-20 02:43:54
Horizontal gene transfer (HGT) analysis according to Sigi-HMM
 
Sigi-HMM
is a tool for the prediction of genomic islands in prokaryotic genomes using hidden markov models.
Select genomic element:
Xanthomonas axonopodis pv. citri str. 306, 306, chromosome
Xanthomonas axonopodis pv. citri str. 306, 306, pXAC33
Xanthomonas axonopodis pv. citri str. 306, 306, pXAC64
Xanthomonas campestris pv. campestris str. 8004, 8004, chromosome
Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913, chromosome
Xanthomonas campestris pv. vesicatoria str. 85-10, 85-10, chromosome
Xanthomonas campestris pv. vesicatoria str. 85-10, 85-10, pXCV183
Xanthomonas campestris pv. vesicatoria str. 85-10, 85-10, pXCV19
Xanthomonas campestris pv. vesicatoria str. 85-10, 85-10, pXCV2
Xanthomonas campestris pv. vesicatoria str. 85-10, 85-10, pXCV38
Xanthomonas oryzae pv. oryzae KACC10331, KACC10331, chromosome
Xylella fastidiosa 9a5c, chromosome
Xylella fastidiosa 9a5c, pXF1.3
Xylella fastidiosa 9a5c, pXF51
Xylella fastidiosa Temecula1, Temecula1, chromosome
Xylella fastidiosa Temecula1, Temecula1, pXFPD1.3
Xylella fastidiosa, ATTC 35868, pXF868
Graphics
Table of all Genes
Table of putative alien Genes
Free access