XGB - The Xanthomonas Genome Browser - Gene list

Title

+ Xanthomonas axonopodis pv. citri str. 306, 306

+ Xanthomonas campestris pv. campestris str. 8004, 8004

+ Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913

+ Xanthomonas campestris pv. vesicatoria str. 85-10, 85-10

+ Xanthomonas oryzae pv. oryzae KACC10331, KACC10331

+ Xylella fastidiosa 9a5c

+ Xylella fastidiosa Temecula1, Temecula1

+ Xylella fastidiosa, ATTC 35868

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

Gene list

Applied filters:

COG category: Cytoskeleton

Number of genes found: 6

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Xanthomonas axonopodis pv. citri str. 306, 306

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
XAC0181		conserved hypothetical protein	chromosome	CDS	223451	348	+	0.672414
XAC1240		conserved hypothetical protein	chromosome	CDS	1417293	600	+	0.676667

Xanthomonas campestris pv. campestris str. 8004, 8004
Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	XC_3100	conserved hypothetical protein	chromosome	CDS	3713652	594	-	0.686869

Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913
Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
XCC1142		conserved hypothetical protein	chromosome	CDS	1329140	594	+	0.686869

Xanthomonas campestris pv. vesicatoria str. 85-10, 85-10
Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	XCV1274	putative secreted protein	chromosome	CDS	1431739	591	+	0.676819
NA	XCV1568	hypothetical protein	chromosome	CDS	1768666	282	-	0.617021