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2024-05-03 06:27:37

Gene list

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COG category: Transcription

Number of genes found: 1459

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Xanthomonas axonopodis pv. citri str. 306, 306
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
XAC0039 transcriptional regulatorchromosome CDS48629 876 + 0.655251
XAC0064 acetyltransferasechromosome CDS77555 567 - 0.663139
XAC0070 ankyrin-like proteinchromosome CDS82247 1722 + 0.69338
XAC0136 two-component system regulatory proteinchromosome CDS159958 633 + 0.696682
XAC0140 transcriptional regulatorchromosome CDS162764 3348 - 0.68399
XAC0166 transcriptional regulator lacI familychromosome CDS205185 1029 + 0.690962
XAC0175 transcriptional regulator asnC familychromosome CDS215008 483 + 0.666667
XAC0188 transcriptional regulatorchromosome CDS230731 582 - 0.536082
XAC0218 conserved hypothetical proteinchromosome CDS266514 645 + 0.657364
XAC0251 transcriptional regulator tetR familychromosome CDS299947 633 + 0.669826
XAC0253 transcriptional regulator araC familychromosome CDS301169 762 - 0.670604
XAC0266 transcriptional regulator acrR familychromosome CDS320996 621 + 0.68599
XAC0281 transcriptional regulator marR familychromosome CDS335549 462 + 0.636364
XAC0302 transcriptional regulator lysR familychromosome CDS359407 954 + 0.646751
XAC0312 transcriptional regulator lysR familychromosome CDS373182 918 + 0.678649
XAC0316 transcriptional regulator lysR familychromosome CDS377525 888 - 0.676802
XAC0318 transcriptional regulator merR familychromosome CDS379809 408 - 0.666667
XAC0340 conserved hypothetical proteinchromosome CDS407014 432 + 0.652778
XAC0351 transcriptional regulator MarR familychromosome CDS419273 477 + 0.67086
XAC0451 transcriptional regulator marR/emrR familychromosome CDS540888 489 - 0.654397
XAC0474 N-acetyltransferasechromosome CDS564086 492 + 0.678862
XAC0508 transcriptional regulator lysR familychromosome CDS595808 903 - 0.705426
XAC0524 transcriptional regulator pbsX familychromosome CDS614976 378 - 0.695767
XAC0559 conserved hypothetical proteinchromosome CDS660837 465 - 0.668817
XAC0581 transcriptional regulator araC familychromosome CDS683619 924 + 0.645022
XAC0625 conserved hypothetical proteinchromosome CDS739348 966 + 0.642857
XAC0671 transcriptional regulatorchromosome CDS796213 906 + 0.69426
XAC0711 transcriptional regulator gntR familychromosome CDS844988 768 + 0.679688
XAC0713 transcriptional regulator lacI familychromosome CDS847117 1068 + 0.65824
XAC0730 two-component system regulatory proteinchromosome CDS870648 720 - 0.655556
XAC0737 transcriptional regulatorchromosome CDS877322 1401 - 0.673091
XAC0744 conserved hypothetical proteinchromosome CDS885048 525 + 0.641905
XAC0745 acetyltransferasechromosome CDS885578 477 + 0.645702
XAC0807 transcriptional regulator tetR/acrR familychromosome CDS961224 645 + 0.666667
XAC0884 transcriptional regulator marR familychromosome CDS1046335 474 - 0.685654
XAC0896 two-component system regulatory proteinchromosome CDS1058087 465 - 0.658065
XAC0898 two-component system regulatory proteinchromosome CDS1060455 708 - 0.686441
XAC0917 transcriptional regulatorchromosome CDS1080998 600 + 0.691667
XAC0922 ECF sigma factorchromosome CDS1084577 666 - 0.68018
XAC1055 hypothetical proteinchromosome CDS1212440 588 - 0.556122
XAC1095 conserved hypothetical proteinchromosome CDS1248288 750 + 0.674667
XAC1140 conserved hypothetical proteinchromosome CDS1291803 261 + 0.597701
XAC1161 conserved hypothetical proteinchromosome CDS1324558 591 + 0.715736
XAC1166 conserved hypothetical proteinchromosome CDS1329454 531 + 0.659134
XAC1185 conserved hypothetical proteinchromosome CDS1350353 639 + 0.652582
XAC1229 two-component system regulatory proteinchromosome CDS1407686 645 + 0.654264
XAC1298 transcriptional regulatorchromosome CDS1486143 696 + 0.706897
XAC1311 transcriptional regulatorchromosome CDS1513070 1386 - 0.681097
XAC1398 conserved hypothetical proteinchromosome CDS1611106 363 + 0.655647
XAC1442 transcriptional regulatorchromosome CDS1664995 816 - 0.715686
XAC1455 transcriptional regulator marR familychromosome CDS1679787 501 + 0.600798
XAC1480 transcriptional regulatorchromosome CDS1709363 1035 - 0.614493
XAC1493 transcriptional regulatorchromosome CDS1725475 330 + 0.524242
XAC1499 transcriptional regulatorchromosome CDS1733523 297 + 0.538721
XAC1548 transcriptional regulator gntR familychromosome CDS1789425 363 - 0.603306
XAC1555 transcriptional regulatorchromosome CDS1795532 1107 + 0.673893
XAC1561 transcriptional regulatorchromosome CDS1804422 996 - 0.669679
XAC1612 transcriptional regulatorchromosome CDS1858906 714 + 0.602241
XAC1655 transcriptional regulatorchromosome CDS1907171 1002 + 0.662675
XAC1663 hypothetical proteinchromosome CDS1917391 537 + 0.569832
XAC1748 transcriptional regulatorchromosome CDS2009334 945 + 0.679365
XAC1883 conserved hypothetical proteinchromosome CDS2188117 249 + 0.666667
XAC1912 serine/threonine kinasechromosome CDS2237697 849 + 0.537102
XAC1968 response regulatorchromosome CDS2300074 384 - 0.583333
XAC1970 response regulatorchromosome CDS2302086 633 - 0.660348
XAC2014 transcriptional regulator tetR familychromosome CDS2357615 633 - 0.652449
XAC2037 iron dependent repressorchromosome CDS2382218 450 + 0.686667
XAC2049 conserved hypothetical proteinchromosome CDS2393976 198 + 0.611111
XAC2166 transcriptional regulatorchromosome CDS2535718 687 - 0.62591
XAC2168 two-component system regulatory proteinchromosome CDS2539741 642 + 0.67134
XAC2171 transcriptional regulator lysR familychromosome CDS2542779 921 - 0.65038
XAC2176 conserved hypothetical proteinchromosome CDS2549088 297 + 0.626263
XAC2191 two-component system regulatory proteinchromosome CDS2564057 576 + 0.637153
XAC2204 phage-related proteinchromosome CDS2588897 228 + 0.675439
XAC2228 transcriptional regulator tetR familychromosome CDS2611822 612 - 0.650327
XAC2313 transcriptional regulator lacI familychromosome CDS2707521 1023 - 0.692082
XAC2317 conserved hypothetical proteinchromosome CDS2710739 1239 + 0.671509
XAC2350 conserved hypothetical proteinchromosome CDS2745596 456 - 0.644737
XAC2429 conserved hypothetical proteinchromosome CDS2828598 279 - 0.587814
XAC2443 conserved hypothetical proteinchromosome CDS2842906 1395 + 0.54552
XAC2452 conserved hypothetical proteinchromosome CDS2856807 372 - 0.615591
XAC2490 conserved hypothetical proteinchromosome CDS2901431 885 + 0.674576
XAC2493 two-component system regulatory proteinchromosome CDS2908126 987 + 0.665653
XAC2497 transcriptional regulator tetR/acrR familychromosome CDS2917344 660 + 0.656061
XAC2500 transcriptional regulator lacI familychromosome CDS2923216 996 - 0.682731
XAC2515 transcriptional regulator asnC/lrp familychromosome CDS2944665 441 - 0.662132
XAC2551 transcriptional regulatorchromosome CDS3009586 681 + 0.637298
XAC2587 conserved hypothetical proteinchromosome CDS3048046 357 - 0.621849
XAC2595 maltose transport gene repressorchromosome CDS3056086 1122 + 0.666667
XAC2791 transcriptional regulatorchromosome CDS3271850 993 + 0.666667
XAC2838 transcriptional regulator lysR familychromosome CDS3327429 915 + 0.693989
XAC2839 transcriptional regulatorchromosome CDS3329048 954 + 0.651992
XAC2841 transcriptional regulatorchromosome CDS3330683 675 - 0.663704
XAC2845 transcriptional regulatorchromosome CDS3337365 621 + 0.640902
XAC2850 conserved hypothetical proteinchromosome CDS3342411 612 - 0.661765
XAC2857 conserved hypothetical proteinchromosome CDS3349777 543 + 0.655617
XAC2934 conserved hypothetical proteinchromosome CDS3438758 459 + 0.655773
XAC2939 acetyltransferasechromosome CDS3444259 540 + 0.624074
XAC2966 conserved hypothetical proteinchromosome CDS3470487 228 - 0.662281
XAC3007 conserved hypothetical proteinchromosome CDS3518386 774 - 0.652455
XAC3012 conserved hypothetical proteinchromosome CDS3522485 255 + 0.65098
XAC3052 transcriptional regulatorchromosome CDS3572649 609 - 0.646962
XAC3134 transcriptional regulator lysR familychromosome CDS3686345 903 + 0.66113
XAC3153 acetyltransferasechromosome CDS3703077 642 - 0.641745
XAC3288 conserved hypothetical proteinchromosome CDS3867874 339 - 0.640118
XAC3362 TonB-like proteinchromosome CDS3958229 1299 - 0.660508
XAC3407 conserved hypothetical proteinchromosome CDS4014669 222 + 0.63964
XAC3432 conserved hypothetical proteinchromosome CDS4040520 660 - 0.686364
XAC3443 response regulatorchromosome CDS4054139 1149 + 0.670148
XAC3445 transcriptional regulatorchromosome CDS4058597 894 - 0.638702
XAC3459 transcriptional regulator lysR familychromosome CDS4081746 885 + 0.671186
XAC3461 transcriptional regulatorchromosome CDS4086091 654 + 0.642202
XAC3480 transcriptional regulator luxR/uhpA familychromosome CDS4112580 639 - 0.663537
XAC3497 hypothetical proteinchromosome CDS4135035 384 + 0.609375
XAC3532 transcriptional regulatorchromosome CDS4176196 729 + 0.662551
XAC3618 conserved hypothetical proteinchromosome CDS4291532 507 + 0.712032
XAC3708 transcriptional regulatorchromosome CDS4383899 897 + 0.670011
XAC3761 transcriptional regulatorchromosome CDS4438977 927 - 0.667745
XAC3771 hypothetical proteinchromosome CDS4448311 219 - 0.694064
XAC3772 transcriptional regulator lysR familychromosome CDS4448376 864 - 0.670139
XAC3927 conserved hypothetical proteinchromosome CDS4618988 555 + 0.643243
XAC3950 conserved hypothetical proteinchromosome CDS4644639 882 - 0.5839
XAC3953 conserved hypothetical proteinchromosome CDS4649598 315 - 0.542857
XAC3961 transcriptional regulator tetR familychromosome CDS4657475 648 + 0.666667
XAC3993 two-component system regulatory proteinchromosome CDS4684547 603 - 0.661692
XAC4038 transcriptional regulator lysR familychromosome CDS4730010 915 - 0.69071
XAC4056 transcriptional regulatorchromosome CDS4752274 201 - 0.577114
XAC4116 serine/threonine kinasechromosome CDS4829001 3708 - 0.702265
XAC4172 transcriptional regulatorchromosome CDS4905547 1158 + 0.695164
XAC4237 transcriptional regulatory proteinchromosome CDS5002163 747 - 0.67336
XAC4272 transcriptional regulator lacI familychromosome CDS5042064 1053 + 0.694207
XAC4350 transcriptional regulatorchromosome CDS5143356 933 + 0.717042
XAC4359 sugar diacide regulatorchromosome CDS5153769 1212 - 0.69802
acoK transcriptional regulatorchromosome CDS4026449 2772 + 0.667388
acoR transcriptional regulator acoRchromosome CDS773462 1986 - 0.688822
adpA transcriptional regulator araC familychromosome CDS4760796 1011 + 0.669634
ahyR transcriptional regulator ahyR/asaR familychromosome CDS3493810 765 - 0.63268
algH transcriptional regulatorchromosome CDS3425655 567 - 0.663139
algR two-component system regulatory proteinchromosome CDS736179 738 + 0.669377
algR transcriptional regulator proteinchromosome CDS4395361 777 - 0.67825
algU RNA polymerase sigma-H factorchromosome CDS1524062 621 + 0.626409
ameR transcriptional regulator tetR/acrR familychromosome CDS520225 618 + 0.621359
ampR B-lactamase regulatory proteinchromosome CDS4508823 948 - 0.67827
ampR transcriptional activator ampR familychromosome CDS3715677 876 + 0.703196
avtA valine-pyruvate aminotransferasechromosome CDS2152651 1284 + 0.662773
baeR two-component system regulatory proteinchromosome CDS3286708 690 + 0.644928
baf transcriptional regulatorchromosome CDS4707179 729 - 0.711934
blaI transcriptional regulator blaI familychromosome CDS3959517 366 - 0.639344
cebR transcriptional regulatorchromosome CDS4120821 1032 + 0.656008
colR two-component system regulatory proteinchromosome CDS995272 747 + 0.637216
colR two-component system regulatory proteinchromosome CDS3831602 678 - 0.638643
colR two-component system regulatory proteinchromosome CDS1401059 717 + 0.656904
creB two-component system regulatory proteinchromosome CDS3347644 693 - 0.694084
cspA major cold shock proteinchromosome CDS2790530 210 - 0.62381
cspA major cold shock proteinchromosome CDS1692583 216 + 0.546296
cysB transcriptional regulator lysR familychromosome CDS3934293 984 - 0.679878
dbpA ATP-dependent RNA helicasechromosome CDS2784754 1377 + 0.670298
deaD ATP-dependent RNA helicasechromosome CDS3299957 1899 - 0.678778
dinG ATP-dependent helicasechromosome CDS4721104 2136 - 0.658708
dnrO repressorchromosome CDS2863238 966 - 0.710145
ecfR extracytoplasmic sigma factorchromosome CDS4849390 540 - 0.67963
feaR transcriptional regulatorchromosome CDS4875665 672 + 0.654762
fis DNA-binding proteinchromosome CDS612956 273 - 0.619048
flbD transcriptional regulatorchromosome CDS1004256 1128 - 0.66578
fldY transcriptional regulatorchromosome CDS4883920 1308 - 0.714832
flgM flagellar proteinchromosome CDS2321035 312 + 0.628205
fliA RNA polymerase sigma factorchromosome CDS2258166 768 - 0.666667
gacA transcriptional regulator luxR/uhpA familychromosome CDS2463557 648 + 0.601852
gbpR galactose-binding protein regulatorchromosome CDS2023515 972 + 0.664609
glpR glycerol-3-phosphate regulon repressorchromosome CDS431189 771 - 0.662776
greA transcriptional elongation factorchromosome CDS2160878 477 + 0.616352
greB transcription elongation factor and transcript cleavagechromosome CDS3197922 507 + 0.656805
hrcA heat-inducible transcriptional repressorchromosome CDS1753445 1032 + 0.686047
hrpG HrpG proteinchromosome CDS1444841 792 - 0.611111
hrpXct HrpX proteinchromosome CDS1446457 1431 + 0.645003
hutC histidine utilization repressorchromosome CDS1892903 717 + 0.679219
icfG IcfG proteinchromosome CDS671960 2082 - 0.681076
kdgR transcriptional regulator kdgRchromosome CDS4929315 750 + 0.685333
kdpE two-component system regulatory proteinchromosome CDS903904 717 + 0.662483
lexA LexA repressorchromosome CDS1999076 642 + 0.646417
lexA LexA repressorchromosome CDS1362326 606 + 0.674918
lrp leucine responsive regulatory proteinchromosome CDS4366586 480 + 0.625
lytT two-component system regulatory proteinchromosome CDS2496349 693 - 0.627706
mdcY transcriptional regulator mdcY familychromosome CDS669438 720 + 0.666667
mecI methicillin resistance proteinchromosome CDS81857 387 + 0.666667
metR transcriptional regulator metE/metH familychromosome CDS398525 915 - 0.64918
mfd transcription-repair coupling factorchromosome CDS3350752 3465 + 0.658874
nocR transcriptional regulatorchromosome CDS2663622 918 + 0.67756
nusA N utilization substance protein Achromosome CDS3148007 1512 - 0.644841
nusB transcription termination factor NusBchromosome CDS890981 480 + 0.675
nusG transcription antitermination factorchromosome CDS1117906 558 + 0.596774
orf8 plasmid-related proteinchromosome CDS2624846 2301 + 0.661452
orf88 phage-related proteinchromosome CDS2550969 363 + 0.655647
oxyR hydrogen peroxide-inducible genes activatorchromosome CDS1766099 900 - 0.664444
oxyR oxidative stress transcriptional regulatorchromosome CDS1065898 942 - 0.632696
paiB transcriptional regulator protein Pai2chromosome CDS1861501 651 - 0.652842
parB XACb0053 partition protein BpXAC64 CDS46022 1032 - 0.61531
parB chromosome partitioning proteinchromosome CDS4591768 927 + 0.685005
pcaQ transcriptional regulatorchromosome CDS1041053 996 + 0.656627
pcaR transcriptional regulatorchromosome CDS443452 891 - 0.693603
phoB two-component system regulatory proteinchromosome CDS1203405 690 - 0.652174
phoP two-component system regulatory proteinchromosome CDS4714904 684 - 0.609649
pknB serine/threonine kinasechromosome CDS4846892 2298 - 0.692776
pobR PobR regulatorchromosome CDS423572 888 - 0.647523
prpR propionate catabolism regulatory proteinchromosome CDS1285128 1599 - 0.667917
prtI ECF sigma factorchromosome CDS4680937 516 - 0.674419
prtR transmembrane regulator protein prtRchromosome CDS4680188 753 - 0.671979
rbcR transcriptional regulatorchromosome CDS303652 957 - 0.648903
recG ATP-dependent DNA helicasechromosome CDS3997178 2154 - 0.670381
regR two-component system regulatory proteinchromosome CDS2070242 567 - 0.656085
relA ATP:GTP 3'-pyrophosphotranferasechromosome CDS3659326 2184 - 0.674908
rfaY RNA polymerase ECF-type sigma factorchromosome CDS3302023 498 + 0.65261
rhlB ATP-dependent RNA helicasechromosome CDS4502369 1716 - 0.680653
rhlE ATP-dependent RNA helicasechromosome CDS527052 1293 - 0.688322
rhlE ATP-dependent RNA helicasechromosome CDS4282079 1383 + 0.680405
rho transcription termination factor Rhochromosome CDS4505458 1281 + 0.623731
rnc ribonuclease IIIchromosome CDS1530542 681 + 0.654919
rnk regulator of nucleoside diphosphate kinasechromosome CDS1064918 417 - 0.669065
rpfD regulatory proteinchromosome CDS2174014 915 + 0.681967
rpfG response regulatorchromosome CDS2178162 1137 + 0.66051
rpoA RNA polymerase alpha subunitchromosome CDS1147785 999 + 0.620621
rpoB RNA polymerase beta subunitchromosome CDS1121568 4152 + 0.624759
rpoC RNA polymerase beta' subunitchromosome CDS1125870 4215 + 0.629182
rpoD RNA polymerase sigma-70 factorchromosome CDS4456172 1878 - 0.611821
rpoE RNA polymerase sigma-E factorchromosome CDS1939735 582 - 0.651203
rpoE RNA polymerase sigma factorchromosome CDS1588461 564 - 0.659574
rpoE ECF sigma factorchromosome CDS4850278 528 + 0.672348
rpoH RNA polymerase sigma-32 factorchromosome CDS4498013 876 - 0.630137
rpoN RNA polymerase sigma-54 factorchromosome CDS3474236 1440 + 0.68125
rpoN RNA polymerase sigma-54 factorchromosome CDS2300466 1404 - 0.674501
rpoZ RNA polymerase omega subunitchromosome CDS4002112 300 - 0.623333
salR transcriptional regulator lacI familychromosome CDS3888389 1053 + 0.662868
salR sal operon transcriptional repressorchromosome CDS4986041 1074 - 0.658287
scoF cold shock proteinchromosome CDS1542586 207 + 0.599034
slyA transcriptional regulator for cryptic hemolysinchromosome CDS5088932 453 + 0.686534
slyA transcriptional regulator for cryptic hemolysinchromosome CDS1924031 465 - 0.666667
smeR two-component system regulatory proteinchromosome CDS386341 684 - 0.697368
soxR transcriptional regulator soxR familychromosome CDS3511939 435 - 0.68046
spoT pentaphosphate guanosine-3'-pyrophosphohydrolasechromosome CDS3999812 2172 - 0.646869
tcsR two-component system regulatory proteinchromosome CDS4916239 669 + 0.651719
tctD two-component system regulatory proteinchromosome CDS4115955 702 - 0.648148
tex transcription-related proteinchromosome CDS2396350 2361 + 0.650995
trpI transcriptional regulatorchromosome CDS3178717 927 + 0.691478
uidR transcriptional regulator uid familychromosome CDS1334967 630 - 0.639683
vacB RNase Rchromosome CDS1809727 2145 + 0.640093
vanR transcriptional regulator gntR familychromosome CDS1038804 675 - 0.654815
virS virulence regulating proteinchromosome CDS626028 1011 + 0.669634
xylR xylose repressor-like proteinchromosome CDS90593 1158 + 0.683074
ybcM transcriptional regulatorchromosome CDS866458 795 - 0.677987
ybhD transcriptional regulatorchromosome CDS4109222 903 - 0.648948
yeaM transcriptional regulator araC familychromosome CDS2618236 795 + 0.611321
ygiX two-component system regulatory proteinchromosome CDS4668604 666 + 0.638138
yhjC transcriptional regulator lysR familychromosome CDS102007 912 + 0.666667
yoaA ATP-dependent helicasechromosome CDS3649621 2025 - 0.680988
yybA transcriptional regulator marR familychromosome CDS1665969 441 + 0.664399
 
Xanthomonas campestris pv. campestris str. 8004, 8004
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA XC_1193 RNA polymerase sigma-70 factorchromosome CDS1449616 573 - 0.630017
NA XC_0750 transcriptional regulator gntR familychromosome CDS896316 768 + 0.678385
NA XC_0309 transcriptional regulator lysR familychromosome CDS366415 918 + 0.694989
NA XC_4025 transcriptional regulatorchromosome CDS4739359 729 - 0.728395
NA XC_2934 RNA polymerase sigma factorchromosome CDS3518867 588 - 0.661565
NA XC_1555 transcription elongation factor and transcript cleavagechromosome CDS1871600 507 - 0.660749
NA XC_0808 transcriptional regulatorchromosome CDS966724 1032 - 0.685078
NA XC_1527 conserved hypothetical proteinchromosome CDS1836882 111 - 0.63964
NA XC_3316 RNA polymerase alpha subunitchromosome CDS3971298 999 - 0.621622
NA XC_2905 RNA polymerase sigma factorchromosome CDS3490552 564 + 0.663121
NA XC_1022 regulatory protein bphRchromosome CDS1235842 885 - 0.518644
NA XC_2765 heat-inducible transcriptional repressorchromosome CDS3322228 1110 - 0.685586
NA XC_4163 transcriptional regulator araC familychromosome CDS4907599 1254 + 0.685805
NA XC_0385 transcriptional regulatorchromosome CDS446677 861 - 0.707317
NA XC_0225 conserved hypothetical proteinchromosome CDS271800 2502 + 0.61311
NA XC_0752 transcriptional regulator lacI familychromosome CDS898447 1068 + 0.669476
NA XC_2816 major cold shock proteinchromosome CDS3387130 216 - 0.569444
NA XC_0166 transcriptional regulator asnC familychromosome CDS207035 483 + 0.681159
NA XC_1051 conserved hypothetical proteinchromosome CDS1267659 492 - 0.648374
NA XC_3099 RNA polymerase sigma factorchromosome CDS3712240 1203 + 0.680798
NA XC_3631 kinasechromosome CDS4311374 2295 - 0.571678
NA XC_1021 conserved hypothetical proteinchromosome CDS1235521 294 + 0.55102
NA XC_3188 conserved hypothetical proteinchromosome CDS3819692 531 - 0.647834
NA XC_0449 transcriptional regulator marR/emrR familychromosome CDS535846 489 - 0.664622
NA XC_2988 conserved hypothetical proteinchromosome CDS3581262 411 + 0.583942
NA XC_2982 transcriptional regulatorchromosome CDS3569487 1383 + 0.680405
NA XC_0522 transcriptional regulator pbsX familychromosome CDS618915 378 - 0.695767
NA XC_3997 two-component system regulatory proteinchromosome CDS4712381 603 - 0.6733
NA XC_3981 two-component system regulatory proteinchromosome CDS4697425 666 + 0.666667
NA XC_1758 conserved hypothetical proteinchromosome CDS2136112 1095 - 0.70137
NA XC_1348 conserved hypothetical proteinchromosome CDS1635239 459 - 0.660131
NA XC_0341 AttT proteinchromosome CDS402049 459 - 0.570806
NA XC_2142 conserved hypothetical proteinchromosome CDS2569935 417 - 0.673861
NA XC_3747 transcriptional regulator proteinchromosome CDS4436507 777 - 0.687259
NA XC_2887 conserved hypothetical proteinchromosome CDS3470387 369 - 0.653117
NA XC_2382 conserved hypothetical proteinchromosome CDS2873744 327 - 0.678899
NA XC_0955 transcriptional regulatorchromosome CDS1147914 870 + 0.673563
NA XC_3956 conserved hypothetical proteinchromosome CDS4674645 540 + 0.692593
NA XC_0334 conserved hypothetical proteinchromosome CDS395626 429 + 0.666667
NA XC_1178 ATP-dependent helicasechromosome CDS1428033 2007 + 0.676134
NA XC_3251 conserved hypothetical proteinchromosome CDS3893860 750 - 0.696
NA XC_1153 transcriptional regulator lysR familychromosome CDS1394404 918 - 0.678649
NA XC_2600 conserved hypothetical proteinchromosome CDS3138141 393 - 0.559796
NA XC_0956 pentaphosphate guanosine-3'-pyrophosphohydrolasechromosome CDS1148975 2172 - 0.648711
NA XC_1948 iron dependent repressorchromosome CDS2352776 468 + 0.668803
NA XC_2955 cold shock proteinchromosome CDS3540467 207 - 0.608696
NA XC_2652 histidine utilization repressorchromosome CDS3190263 636 - 0.677673
NA XC_2345 putative transcriptional elongation factorchromosome CDS2835205 477 - 0.641509
NA XC_1417 conserved hypothetical proteinchromosome CDS1712962 543 - 0.657459
NA XC_3410 transcriptional regulatorchromosome CDS4061669 744 + 0.680108
NA XC_3175 transcriptional regulator uid familychromosome CDS3805390 630 + 0.636508
NA XC_0556 RNA polymerase sigma factorchromosome CDS665245 510 + 0.701961
NA XC_2631 conserved hypothetical proteinchromosome CDS3167422 342 - 0.625731
NA XC_4118 transcriptional regulatorchromosome CDS4852337 1263 - 0.733967
NA XC_3966 transcriptional regulator tetR familychromosome CDS4683793 648 + 0.680556
NA XC_3934 chromosome partitioning proteinchromosome CDS4647685 930 + 0.691398
NA XC_1833 ATP-dependent RNA helicasechromosome CDS2226058 1377 - 0.672476
NA XC_3790 transcriptional regulatorchromosome CDS4485618 933 - 0.670954
NA XC_1365 transcriptional regulatorchromosome CDS1650585 567 + 0.671958
NA XC_2046 plasmid-related proteinchromosome CDS2459407 2307 - 0.628088
NA XC_1173 ATP:GTP 3'-pyrophosphotranferasechromosome CDS1418501 2172 + 0.691529
NA XC_4261 transcriptional regulatorchromosome CDS5055172 912 - 0.694079
NA XC_3399 regulator of nucleoside diphosphate kinasechromosome CDS4051382 408 + 0.681373
NA XC_3386 transcriptional regulatorchromosome CDS4035544 660 - 0.701515
NA XC_3126 two-component system regulatory proteinchromosome CDS3733356 720 - 0.683333
NA XC_1272 conserved hypothetical proteinchromosome CDS1559446 774 + 0.664083
NA XC_3151 LexA repressorchromosome CDS3769097 606 - 0.70132
NA XC_3425 transcriptional regulatorchromosome CDS4074875 1002 - 0.667665
NA XC_4306 transcriptional regulatorchromosome CDS5108002 921 + 0.717698
NA XC_1129 acetyltransferasechromosome CDS1372392 528 + 0.668561
NA XC_1416 transcription-repair coupling factorchromosome CDS1708793 3468 - 0.662341
NA XC_0580 transcriptional regulator mdcY familychromosome CDS692530 720 + 0.659722
NA XC_1909 transcriptional regulator lacI familychromosome CDS2304283 1023 + 0.69697
NA XC_0072 transcriptional regulatorchromosome CDS86107 198 - 0.651515
NA XC_2723 transcriptional regulatorchromosome CDS3272116 1053 + 0.662868
NA XC_4061 transcriptional regulatorchromosome CDS4781589 201 - 0.631841
NA XC_0159 transcriptional regulator lacI familychromosome CDS198595 1068 + 0.689139
NA XC_0318 SIR2-like regulatory proteinchromosome CDS376475 882 + 0.693878
NA XC_0891 transcriptional regulatorchromosome CDS1072172 2766 - 0.686913
NA XC_1905 conserved hypothetical proteinchromosome CDS2300826 1206 - 0.676617
NA XC_4162 transcriptional regulatorchromosome CDS4906806 750 + 0.692
NA XC_0916 transcriptional regulator blaI familychromosome CDS1097105 420 - 0.619048
NA XC_0778 transcriptional regulatorchromosome CDS935291 1542 - 0.688067
NA XC_0816 transcriptional regulator luxR/uhpA familychromosome CDS975443 639 + 0.657277
NA XC_2773 conserved hypothetical proteinchromosome CDS3331590 180 - 0.7
NA XC_0273 transcriptional regulator marR familychromosome CDS328019 462 + 0.658009
NA XC_1437 transcriptional regulator lysR familychromosome CDS1735330 915 - 0.662295
NA XC_1240 transcriptional regulatorchromosome CDS1517700 609 + 0.646962
NA XC_3542 acetyltransferasechromosome CDS4205461 474 - 0.654008
NA XC_3720 leucine responsive regulatory proteinchromosome CDS4407506 480 + 0.620833
NA XC_4277 DNA-binding proteinchromosome CDS5069750 270 + 0.562963
NA XC_2718 RNase Rchromosome CDS3264916 2424 - 0.648102
NA XC_3027 transcriptional regulatorchromosome CDS3621335 627 + 0.633174
NA XC_0245 transcriptional regulator araC familychromosome CDS295184 738 - 0.723577
NA XC_1343 acetyltransferasechromosome CDS1629564 540 - 0.67963
NA XC_1457 transcriptional regulatorchromosome CDS1758382 423 - 0.685579
NA XC_0770 two-component system regulatory proteinchromosome CDS926819 720 - 0.661111
NA XC_3848 ATP-dependent RNA helicasechromosome CDS4545008 1722 - 0.692799
NA XC_0584 IcfG proteinchromosome CDS696000 2082 - 0.685399
NA XC_1049 two-component system regulatory proteinchromosome CDS1265512 678 + 0.634218
NA XC_0327 transcriptional regulator metE/metH familychromosome CDS386987 906 - 0.646799
NA XC_3152 conserved hypothetical proteinchromosome CDS3769980 630 - 0.634921
NA XC_0832 transcriptional regulator lysR familychromosome CDS1001091 903 - 0.689922
NA XC_1102 transcriptional regulator araC familychromosome CDS1328769 960 + 0.719792
NA XC_1752 transcriptional regulator araC familychromosome CDS2125358 1002 - 0.659681
NA XC_4294 acetyltransferasechromosome CDS5096736 612 + 0.635621
NA XC_3272 two-component system regulatory proteinchromosome CDS3917548 690 + 0.669565
NA XC_0363 transcriptional regulator marR familychromosome CDS423866 477 + 0.679245
NA XC_3212 conserved hypothetical proteinchromosome CDS3856333 294 - 0.619048
NA XC_0433 transcriptional regulator tetR/acrR familychromosome CDS513178 624 + 0.633013
NA XC_1657 conserved hypothetical proteinchromosome CDS1992755 357 + 0.616247
NA XC_2166 conserved hypothetical proteinchromosome CDS2611555 309 - 0.63754
NA XC_2729 transcriptional regulatorchromosome CDS3281068 1041 - 0.673391
NA XC_1604 N utilization substance protein Achromosome CDS1924416 1512 + 0.642196
NA XC_0601 transcriptional regulator marR familychromosome CDS718052 540 - 0.62963
NA XC_1490 transcriptional regulatorchromosome CDS1795458 993 - 0.695871
NA XC_2785 helicasechromosome CDS3347629 3198 - 0.559725
NA XC_2430 Predicted transcriptional regulatorchromosome CDS2944305 915 - 0.589071
NA XC_3478 transcriptional regulator tetR/acrR familychromosome CDS4133983 696 - 0.662356
NA XC_2328 conserved hypothetical proteinchromosome CDS2813974 258 - 0.655039
NA XC_2974 RNA polymerase sigma-H factorchromosome CDS3559161 621 - 0.62963
NA XC_0243 transcriptional regulator tetR familychromosome CDS293915 633 + 0.688784
NA XC_1574 transcriptional regulatorchromosome CDS1892918 897 - 0.733556
NA XC_2677 transcriptional regulator protein Pai2chromosome CDS3221779 639 + 0.661972
NA XC_1419 two-component system regulatory proteinchromosome CDS1714806 696 + 0.70546
NA XC_3352 transcription antitermination factorchromosome CDS4001544 558 - 0.611111
NA XC_3162 conserved hypothetical proteinchromosome CDS3789640 639 - 0.676056
NA XC_3452 two-component system regulatory proteinchromosome CDS4101115 747 - 0.635877
NA XC_2566 RNA polymerase sigma-E factorchromosome CDS3100323 582 + 0.642612
NA XC_0043 transcriptional regulatorchromosome CDS53054 891 + 0.681257
NA XC_2736 transcriptional regulator gntR familychromosome CDS3287805 363 + 0.597796
NA XC_0689 transcriptional regulatorchromosome CDS826159 2043 - 0.682819
NA XC_1317 conserved hypothetical proteinchromosome CDS1605580 228 + 0.671053
NA XC_0323 transcriptional regulatorchromosome CDS381373 918 - 0.66122
NA XC_3843 RNA polymerase sigma-32 factorchromosome CDS4540650 876 - 0.619863
NA XC_2204 transcriptional regulator tetR familychromosome CDS2652316 633 + 0.666667
NA XC_1155 conserved hypothetical proteinchromosome CDS1396221 426 + 0.615023
NA XC_0520 DNA-binding proteinchromosome CDS616952 273 - 0.626374
NA XC_1745 transcriptional regulator lacI familychromosome CDS2112787 996 + 0.687751
NA XC_3076 HrpX proteinchromosome CDS3682705 1431 - 0.661775
NA XC_2251 RNA polymerase sigma-54 factorchromosome CDS2709710 1404 + 0.682336
NA XC_2827 transcriptional regulator marR familychromosome CDS3399530 501 - 0.628743
NA XC_0830 transcriptional regulatorchromosome CDS997212 654 - 0.663609
NA XC_0295 transcriptional regulator lysR familychromosome CDS350145 894 + 0.677852
NA XC_1938 two-component system regulatory proteinchromosome CDS2339753 642 - 0.665109
NA XC_3346 RNA polymerase beta' subunitchromosome CDS3989990 4218 - 0.632053
NA XC_3738 transcriptional regulatorchromosome CDS4425425 936 + 0.700855
NA XC_0957 RNA polymerase omega subunitchromosome CDS1151288 300 - 0.626667
NA XC_2801 transcriptional regulatorchromosome CDS3369776 1035 + 0.638647
NA XC_2335 response regulator rpfGchromosome CDS2823436 1137 - 0.639402
NA XC_1020 conserved hypothetical proteinchromosome CDS1234768 651 - 0.545315
NA XC_1311 RNA polymerase sigma-54 factorchromosome CDS1600647 1437 - 0.678497
NA XC_0648 two-component system regulatory proteinchromosome CDS781936 747 + 0.697456
NA XC_3806 RNA polymerase sigma-70 factorchromosome CDS4499598 1875 - 0.613867
NA XC_3347 RNA polymerase beta subunitchromosome CDS3994308 4164 - 0.623199
NA XC_0506 transcriptional regulator lysR familychromosome CDS595057 903 - 0.723145
NA XC_3648 conserved hypothetical proteinchromosome CDS4329767 393 + 0.684478
NA XC_0046 ankyrin-like proteinchromosome CDS55202 1713 + 0.683012
NA XC_1960 conserved hypothetical proteinchromosome CDS2364244 201 + 0.631841
NA XC_0367 PobR regulatorchromosome CDS427221 897 - 0.672241
NA XC_3419 transcriptional regulator marR familychromosome CDS4069963 471 + 0.664544
NA XC_3543 conserved hypothetical proteinchromosome CDS4205940 525 - 0.643809
NA XC_1280 transcriptional regulator soxR familychromosome CDS1566357 447 + 0.695749
NA XC_1489 transcriptional regulatorchromosome CDS1794866 315 - 0.644444
NA XC_2157 transcriptional regulatorchromosome CDS2587959 336 + 0.672619
NA XC_0812 two-component system regulatory proteinchromosome CDS972039 702 + 0.65812
NA XC_1426 conserved hypothetical proteinchromosome CDS1720879 597 + 0.683417
NA XC_3850 transcription termination factor Rhochromosome CDS4548071 1281 + 0.623731
NA XC_0915 TonB-like proteinchromosome CDS1095814 1302 - 0.697389
NA XC_4038 ATP-dependent helicasechromosome CDS4753072 2136 - 0.674157
NA XC_1295 transcriptional regulator ahyR/asaR familychromosome CDS1583309 765 + 0.662745
NA XC_3398 oxidative stress transcriptional regulatorchromosome CDS4050188 942 + 0.644374
NA XC_0984 transcriptional regulator lysR familychromosome CDS1180673 981 + 0.688073
NA XC_0571 conserved hypothetical proteinchromosome CDS683373 534 - 0.705993
NA XC_1790 repressorchromosome CDS2176739 1020 + 0.730392
NA XC_2502 transcriptional regulatorchromosome CDS3029637 945 - 0.687831
NA XC_0210 conserved hypothetical proteinchromosome CDS259213 486 + 0.67284
NA XC_4192 sal operon transcriptional repressorchromosome CDS4948379 1086 - 0.662063
NA XC_3528 two-component system regulatory proteinchromosome CDS4188368 816 - 0.682598
NA XC_3799 transcriptional regulatorchromosome CDS4492839 144 - 0.6875
NA XC_0614 conserved hypothetical proteinchromosome CDS732975 474 + 0.654008
NA XC_0947 ATP-dependent DNA helicasechromosome CDS1136662 2142 - 0.693744
NA XC_4222 transcriptional regulator lacI familychromosome CDS4991628 1053 + 0.710351
NA XC_3404 two-component system regulatory proteinchromosome CDS4055574 708 + 0.685028
NA XC_0773 transcriptional regulatorchromosome CDS930793 915 + 0.621858
NA XC_2457 two-component system regulatory proteinchromosome CDS2970587 576 + 0.689236
NA XC_2510 LexAchromosome CDS3040202 642 - 0.676012
NA XC_0373 glycerol-3-phosphate regulon repressorchromosome CDS434691 780 - 0.678205
NA XC_0850 response regulatorchromosome CDS1029232 1113 - 0.677448
NA XC_1940 transcriptional regulatorchromosome CDS2343688 681 + 0.679883
NA XC_2072 phage-related proteinchromosome CDS2486061 222 - 0.612613
NA XC_3536 transcription termination factor NusBchromosome CDS4200335 480 - 0.658333
NA XC_4150 two-component system regulatory proteinchromosome CDS4893175 669 + 0.653214
NA XC_0651 conserved hypothetical proteinchromosome CDS784979 966 + 0.661491
NA XC_2005 conserved hypothetical proteinchromosome CDS2419392 687 - 0.54294
NA XC_1118 transcriptional activator ampR familychromosome CDS1355266 876 - 0.702055
NA XC_0257 transcriptional regulator acrR familychromosome CDS313255 618 + 0.700647
NA XC_3428 transcriptional regulator gntR familychromosome CDS4077454 675 + 0.671111
NA XC_4142 transcriptional regulatorchromosome CDS4882593 1149 + 0.724978
NA XC_0051 xylose repressor-like proteinchromosome CDS63651 1158 + 0.7038
NA XC_2281 RNA polymerase sigma factorchromosome CDS2748988 768 + 0.666667
NA XC_1266 conserved hypothetical proteinchromosome CDS1555229 252 - 0.670635
NA XC_0438 ATP-dependent RNA helicasechromosome CDS519976 1293 - 0.694509
NA XC_3864 conserved hypothetical proteinchromosome CDS4569296 1278 + 0.672926
NA XC_1475 ATP-dependent RNA helicasechromosome CDS1773724 1929 + 0.687921
NA XC_2639 transcriptional regulatorchromosome CDS3177263 1020 - 0.673529
NA XC_2250 response regulatorchromosome CDS2708852 633 + 0.665087
NA XC_1755 two-component system regulatory proteinchromosome CDS2128943 984 - 0.682927
NA XC_2338 regulatory proteinchromosome CDS2827639 918 - 0.667756
NA XC_2070 conserved hypothetical proteinchromosome CDS2483259 1644 - 0.643552
NA XC_0716 transcriptional regulatorchromosome CDS860241 906 + 0.706402
NA XC_2841 transcriptional regulatorchromosome CDS3415845 864 + 0.736111
NA XC_1696 transcriptional regulatorchromosome CDS2036415 717 - 0.647141
NA XC_0537 ATP-dependent DNA helicasechromosome CDS637335 1317 + 0.609719
NA XC_1006 transcriptional regulator lacI familychromosome CDS1219554 1050 - 0.673333
NA XC_4314 sugar diacide regulatorchromosome CDS5120733 1179 - 0.692112
NA XC_2351 valine-pyruvate aminotransferasechromosome CDS2842412 1233 - 0.666667
NA XC_3383 ECF sigma factorchromosome CDS4033088 693 + 0.662338
NA XC_1435 transcriptional regulatorchromosome CDS1733070 690 + 0.691304
NA XC_3406 two-component system regulatory proteinchromosome CDS4058185 465 + 0.668817
NA XC_2252 response regulatorchromosome CDS2711122 384 + 0.580729
NA XC_1964 transcription-related proteinchromosome CDS2366623 2364 + 0.67555
NA XC_2422 conserved hypothetical proteinchromosome CDS2932415 504 - 0.428571
NA XC_0471 N-acetyltransferasechromosome CDS557789 492 + 0.695122
NA XC_3216 propionate catabolism regulatory proteinchromosome CDS3861727 1602 + 0.69226
NA XC_1828 major cold shock proteinchromosome CDS2221555 210 + 0.6
NA XC_0312 transcriptional regulator lysR familychromosome CDS369780 888 - 0.685811
NA XC_0040 transcriptional regulator lysR familychromosome CDS50747 903 - 0.677741
NA XC_0114 two-component system regulatory proteinchromosome CDS134299 633 + 0.691943
NA XC_4021 transcriptional regulatorchromosome CDS4736418 954 - 0.6174
NA XC_2009 conserved hypothetical proteinchromosome CDS2422887 135 + 0.511111
NA XC_3117 two-component system regulatory proteinchromosome CDS3727015 642 - 0.669782
NA XC_2486 galactose-binding protein regulatorchromosome CDS3015932 972 - 0.684156
NA XC_0848 transcriptional regulatorchromosome CDS1024772 894 + 0.637584
NA XC_1431 transcriptional regulatorchromosome CDS1726452 618 - 0.619741
NA XC_4031 two-component system regulatory proteinchromosome CDS4746677 684 - 0.612573
NA XC_0536 helicasechromosome CDS634435 2904 + 0.576446
NA XC_0118 transcriptional regulatorchromosome CDS138566 3342 - 0.689707
NA XC_3643 ATP-dependent RNA helicasechromosome CDS4325806 1389 + 0.689705
NA XC_4254 transcriptional regulator for cryptic hemolysinchromosome CDS5047208 444 + 0.707207
NA XC_0062 conserved hypothetical proteinchromosome CDS76468 351 + 0.652422
NA XC_1749 transcriptional regulator tetR/acrR familychromosome CDS2119088 660 - 0.665152
NA XC_1649 maltose transport gene repressorchromosome CDS1983882 1134 - 0.65873
NA XC_2840 transcriptional regulator marR familychromosome CDS3415280 444 - 0.675676
NA XC_0045 methicillin resistance proteinchromosome CDS54812 387 + 0.669251
NA XC_2231 flagellar proteinchromosome CDS2690071 312 - 0.628205
NA XC_2096 transcriptional regulator luxR/uhpA familychromosome CDS2519825 648 + 0.621914
NA XC_2968 ribonuclease IIIchromosome CDS3552664 681 - 0.662261
NA XC_1474 RNA polymerase ECF-type sigma factorchromosome CDS1773051 501 - 0.658683
NA XC_2755 hydrogen peroxide-inducible genes activator proteinchromosome CDS3309869 900 + 0.683333
NA XC_1439 transcriptional regulatorchromosome CDS1737096 912 - 0.656798
NA XC_1734 transcriptional regulator asnC/lrp familychromosome CDS2097211 441 + 0.678005
NA XC_0044 transcriptional regulatorchromosome CDS53982 570 - 0.642105
NA XC_0246 transcriptional regulatorchromosome CDS295956 957 - 0.649948
NA XC_0923 transcriptional regulatorchromosome CDS1106909 912 + 0.675439
NA XC_3561 transcriptional regulatorchromosome CDS4228077 729 + 0.687243
NA XC_3077 HrpG proteinchromosome CDS3684958 789 + 0.623574
NA XC_3853 B-lactamase regulatory proteinchromosome CDS4552258 930 - 0.670968
NA XC_3796 transcriptional regulator lysR familychromosome CDS4490647 927 + 0.678533
NA XC_3052 transcriptional regulatorchromosome CDS3653254 1008 - 0.684524
NA XC_1443 transcriptional regulator lysR familychromosome CDS1741641 933 - 0.679528
 
Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
XCC0040 transcriptional regulator lysR familychromosome CDS50748 903 - 0.677741
XCC0043 transcriptional regulatorchromosome CDS53055 891 + 0.681257
XCC0044 transcriptional regulatorchromosome CDS53983 570 - 0.642105
XCC0046 ankyrin-like proteinchromosome CDS55203 1713 + 0.683012
XCC0062 conserved hypothetical proteinchromosome CDS76469 351 + 0.652422
XCC0071 transcriptional regulatorchromosome CDS86108 198 - 0.651515
XCC0109 two-component system regulatory proteinchromosome CDS134703 633 + 0.691943
XCC0114 transcriptional regulatorchromosome CDS138970 3342 - 0.689707
XCC0150 transcriptional regulator lacI familychromosome CDS197489 1068 + 0.689139
XCC0157 transcriptional regulator asnC familychromosome CDS205937 483 + 0.681159
XCC0200 conserved hypothetical proteinchromosome CDS258648 486 + 0.67284
XCC0215 conserved hypothetical proteinchromosome CDS271235 2502 + 0.61311
XCC0233 transcriptional regulator tetR familychromosome CDS293350 633 + 0.688784
XCC0235 transcriptional regulator araC familychromosome CDS294619 738 - 0.723577
XCC0247 transcriptional regulator acrR familychromosome CDS312680 618 + 0.700647
XCC0263 transcriptional regulator marR familychromosome CDS327431 462 + 0.658009
XCC0285 transcriptional regulator lysR familychromosome CDS349536 894 + 0.677852
XCC0298 transcriptional regulator lysR familychromosome CDS365824 918 + 0.694989
XCC0301 transcriptional regulator lysR familychromosome CDS369189 888 - 0.685811
XCC0306 SIR2-like regulatory proteinchromosome CDS375884 882 + 0.693878
XCC0311 transcriptional regulatorchromosome CDS380782 918 - 0.66122
XCC0322 conserved hypothetical proteinchromosome CDS395041 429 + 0.666667
XCC0351 transcriptional regulator marR familychromosome CDS423272 477 + 0.679245
XCC0435 transcriptional regulator marR/emrR familychromosome CDS533757 489 - 0.664622
XCC0457 N-acetyltransferasechromosome CDS555699 492 + 0.695122
XCC0494 transcriptional regulator lysR familychromosome CDS592973 903 - 0.723145
XCC0510 transcriptional regulator pbsX familychromosome CDS616831 378 - 0.695767
XCC0524 helicasechromosome CDS632372 2904 + 0.576446
XCC0525 ATP-dependent DNA helicasechromosome CDS635272 1317 + 0.609719
XCC0585 conserved hypothetical proteinchromosome CDS707517 393 - 0.687023
XCC0672 transcriptional regulatorchromosome CDS811715 729 - 0.687243
XCC0691 conserved hypothetical proteinchromosome CDS834056 525 + 0.643809
XCC0692 acetyltransferasechromosome CDS834586 474 + 0.654008
XCC0755 transcriptional regulator tetR/acrR familychromosome CDS905818 696 + 0.663793
XCC0811 transcriptional regulator marR familychromosome CDS970097 471 - 0.664544
XCC0820 transcriptional regulatorchromosome CDS978118 744 - 0.680108
XCC0824 two-component system regulatory proteinchromosome CDS981881 465 - 0.668817
XCC0826 two-component system regulatory proteinchromosome CDS984249 708 - 0.685028
XCC0844 transcriptional regulatorchromosome CDS1004338 660 + 0.701515
XCC0847 ECF sigma factorchromosome CDS1006761 693 - 0.662338
XCC0993 conserved hypothetical proteinchromosome CDS1145940 750 + 0.696
XCC1034 conserved hypothetical proteinchromosome CDS1183923 294 + 0.619048
XCC1058 conserved hypothetical proteinchromosome CDS1220600 591 + 0.714044
XCC1063 conserved hypothetical proteinchromosome CDS1225544 531 + 0.647834
XCC1067 type III restriction-modification enzyme, helicase subunitchromosome CDS1227462 3123 + 0.582133
XCC1087 conserved hypothetical proteinchromosome CDS1254927 639 + 0.676056
XCC1097 conserved hypothetical proteinchromosome CDS1274587 630 + 0.634921
XCC1128 two-component system regulatory proteinchromosome CDS1317019 642 + 0.669782
XCC1190 transcriptional regulatorchromosome CDS1389083 1008 + 0.684524
XCC1215 transcriptional regulatorchromosome CDS1421815 627 - 0.633174
XCC1253 hypothetical proteinchromosome CDS1462105 411 - 0.583942
XCC1259 transcriptional regulatorchromosome CDS1472908 1383 - 0.683297
XCC1351 conserved hypothetical proteinchromosome CDS1573026 369 + 0.653117
XCC1396 transcriptional regulatorchromosome CDS1627075 864 - 0.736111
XCC1411 transcriptional regulator marR familychromosome CDS1643753 501 + 0.628743
XCC1437 transcriptional regulatorchromosome CDS1672955 1035 - 0.638647
XCC1453 helicasechromosome CDS1692939 3198 + 0.559725
XCC1463 hypothetical proteinchromosome CDS1710488 180 + 0.7
XCC1500 transcriptional regulator gntR familychromosome CDS1754089 363 - 0.597796
XCC1507 transcriptional regulatorchromosome CDS1760148 1041 + 0.673391
XCC1513 transcriptional regulatorchromosome CDS1769088 1053 - 0.662868
XCC1595 transcriptional regulatorchromosome CDS1863983 1020 + 0.673529
XCC1604 conserved hypothetical proteinchromosome CDS1874502 342 + 0.628655
XCC1631 conserved hypothetical proteinchromosome CDS1901388 300 + 0.583333
XCC1730 transcriptional regulatorchromosome CDS2009719 945 + 0.686772
XCC1807 conserved hypothetical proteinchromosome CDS2108385 327 + 0.681957
XCC1861 conserved hypothetical proteinchromosome CDS2168680 258 + 0.655039
XCC1934 response regulatorchromosome CDS2268197 384 - 0.580729
XCC1936 response regulatorchromosome CDS2270218 633 - 0.665087
XCC2018 hypothetical proteinchromosome CDS2367673 309 + 0.644013
XCC2027 transcriptional regulatorchromosome CDS2391038 636 - 0.691824
XCC2041 conserved hypothetical proteinchromosome CDS2409198 417 + 0.673861
XCC2106 conserved hypothetical proteinchromosome CDS2489792 135 - 0.511111
XCC2108 conserved hypothetical proteinchromosome CDS2491268 648 + 0.54321
XCC2158 conserved hypothetical proteinchromosome CDS2546862 201 - 0.631841
XCC2170 iron dependent repressorchromosome CDS2558063 468 - 0.668803
XCC2178 transcriptional regulatorchromosome CDS2566938 681 - 0.679883
XCC2180 two-component system regulatory proteinchromosome CDS2570912 642 + 0.665109
XCC2209 transcriptional regulator lacI familychromosome CDS2606001 1023 - 0.69697
XCC2213 conserved hypothetical proteinchromosome CDS2609275 1206 + 0.676617
XCC2358 conserved hypothetical proteinchromosome CDS2774000 1095 + 0.70137
XCC2361 two-component system regulatory proteinchromosome CDS2781286 984 + 0.682927
XCC2366 transcriptional regulator tetR/acrR familychromosome CDS2791465 660 + 0.665152
XCC2369 transcriptional regulator lacI familychromosome CDS2797430 996 - 0.687751
XCC2380 transcriptional regulator asnC/lrp familychromosome CDS2813561 441 - 0.675737
XCC2416 transcriptional regulatorchromosome CDS2874099 717 + 0.647141
XCC2456 conserved hypothetical proteinchromosome CDS2918108 357 - 0.616247
XCC2464 maltose transport gene repressorchromosome CDS2926204 1134 + 0.65873
XCC2591 hypothetical proteinchromosome CDS3074739 111 + 0.63964
XCC2627 transcriptional regulatorchromosome CDS3113769 993 + 0.695871
XCC2628 transcriptional regulatorchromosome CDS3115039 315 + 0.644444
XCC2659 transcriptional regulatorchromosome CDS3149916 423 + 0.685579
XCC2673 transcriptional regulator lysR familychromosome CDS3166147 933 + 0.679528
XCC2676 transcriptional regulatorchromosome CDS3170713 912 + 0.656798
XCC2678 transcriptional regulator lysR familychromosome CDS3172476 915 + 0.66776
XCC2680 transcriptional regulatorchromosome CDS3174973 690 - 0.692754
XCC2684 transcriptional regulatorchromosome CDS3181663 618 + 0.619741
XCC2689 conserved hypothetical proteinchromosome CDS3187257 597 - 0.683417
XCC2697 conserved hypothetical proteinchromosome CDS3195223 543 + 0.657459
XCC2765 conserved hypothetical proteinchromosome CDS3274279 459 + 0.660131
XCC2770 acetyltransferasechromosome CDS3279852 540 + 0.67963
XCC2796 conserved hypothetical proteinchromosome CDS3304147 228 - 0.671053
XCC2838 conserved hypothetical proteinchromosome CDS3350591 774 - 0.664083
XCC2843 conserved hypothetical proteinchromosome CDS3355331 252 + 0.670635
XCC2868 transcriptional regulatorchromosome CDS3392503 609 - 0.646962
XCC2916 RNA polymerase sigma-70 factorchromosome CDS3460597 573 + 0.630017
XCC2953 conserved hypothetical proteinchromosome CDS3514134 426 - 0.615023
XCC2955 transcriptional regulator lysR familychromosome CDS3515459 918 + 0.676471
XCC3029 acetyltransferasechromosome CDS3575170 528 - 0.668561
XCC3056 transcriptional regulator araC familychromosome CDS3618361 960 - 0.719792
XCC3105 conserved hypothetical proteinchromosome CDS3678716 492 + 0.648374
XCC3142 regulatory protein bphRchromosome CDS3722794 885 + 0.518644
XCC3143 conserved hypothetical proteinchromosome CDS3723706 294 - 0.55102
XCC3144 conserved hypothetical proteinchromosome CDS3724102 651 + 0.545315
XCC3205 TonB-like proteinchromosome CDS3804333 1302 - 0.697389
XCC3213 transcriptional regulatorchromosome CDS3815428 912 + 0.675439
XCC3246 transcriptional regulatorchromosome CDS3857946 870 + 0.678161
XCC3315 response regulatorchromosome CDS3932871 1113 + 0.677448
XCC3317 transcriptional regulatorchromosome CDS3937550 894 - 0.637584
XCC3332 transcriptional regulator lysR familychromosome CDS3961224 903 + 0.689922
XCC3334 transcriptional regulatorchromosome CDS3965352 654 + 0.663609
XCC3349 transcriptional regulator luxR/uhpA familychromosome CDS3988648 639 - 0.657277
XCC3386 transcriptional regulatorchromosome CDS4028032 1410 + 0.694326
XCC3394 two-component system regulatory proteinchromosome CDS4037194 720 + 0.661111
XCC3412 transcriptional regulator lacI familychromosome CDS4065218 1068 - 0.669476
XCC3414 transcriptional regulator gntR familychromosome CDS4067649 768 - 0.679688
XCC3448 transcriptional regulatorchromosome CDS4103605 906 - 0.706402
XCC3509 conserved hypothetical proteinchromosome CDS4177280 966 - 0.661491
XCC3545 conserved hypothetical proteinchromosome CDS4229816 474 - 0.654008
XCC3557 transcriptional regulator marR familychromosome CDS4244673 540 + 0.62963
XCC3608 conserved hypothetical proteinchromosome CDS4302724 534 - 0.705993
XCC3667 transcriptional regulatorchromosome CDS4367868 936 + 0.700855
XCC3719 transcriptional regulatorchromosome CDS4428035 933 - 0.670954
XCC3725 transcriptional regulator lysR familychromosome CDS4433064 927 + 0.678533
XCC3728 transcriptional regulatorchromosome CDS4435256 144 - 0.6875
XCC3776 ATP-dependent RNA helicasechromosome CDS4487426 1722 - 0.692799
XCC3792 conserved hypothetical proteinchromosome CDS4511710 1278 + 0.676056
XCC3871 conserved hypothetical proteinchromosome CDS4599981 540 + 0.692593
XCC3880 transcriptional regulator tetR familychromosome CDS4609115 648 + 0.680556
XCC3909 two-component system regulatory proteinchromosome CDS4637703 603 - 0.6733
XCC3932 transcriptional regulatorchromosome CDS4661740 954 - 0.6174
XCC3971 transcriptional regulatorchromosome CDS4706917 201 - 0.631841
XCC4053 transcriptional regulatorchromosome CDS4808471 1149 + 0.724978
XCC4073 transcriptional regulator araC familychromosome CDS4833477 1254 + 0.685805
XCC4129 transcriptional regulator lacI familychromosome CDS4917445 1053 + 0.711301
XCC4174 transcriptional regulatorchromosome CDS4980974 912 - 0.694079
XCC4205 acetyltransferasechromosome CDS5024051 612 + 0.635621
XCC4217 transcriptional regulatorchromosome CDS5035478 921 + 0.717698
XCC4225 sugar diacide regulatorchromosome CDS5048209 1179 - 0.692112
Z2969 phage-related proteinchromosome CDS3551778 429 - 0.578089
acoK transcriptional regulatorchromosome CDS3885237 2766 + 0.686913
acoR transcriptional regulatorchromosome CDS4135023 2043 + 0.682819
adpA transcriptional regulator araC familychromosome CDS2784853 1002 + 0.659681
ahyR transcriptional regulator ahyR/asaR familychromosome CDS3326728 777 - 0.667954
algH transcriptional regulatorchromosome CDS3258825 567 - 0.671958
algR two-component system regulatory proteinchromosome CDS4180542 747 - 0.697456
algR transcriptional regulator proteinchromosome CDS4378942 777 - 0.687259
algU RNA polymerase sigma factorchromosome CDS1524323 588 + 0.661565
algU RNA polymerase sigma-H factorchromosome CDS1483996 621 + 0.62963
ameR transcriptional regulator tetR/acrR familychromosome CDS511082 624 + 0.633013
ampR transcriptional activator ampR familychromosome CDS3591948 876 + 0.702055
ampR B-lactamase regulatory proteinchromosome CDS4494676 930 - 0.670968
attT AttT proteinchromosome CDS401464 459 - 0.570806
avtA valine-pyruvate aminotransferasechromosome CDS2139273 1233 + 0.666667
baf transcriptional regulatorchromosome CDS4664681 729 - 0.728395
blaI transcriptional regulator blaI familychromosome CDS3805624 420 - 0.619048
cebR transcriptional regulatorchromosome CDS3996974 1032 + 0.685078
colR two-component system regulatory proteinchromosome CDS1310600 720 + 0.683333
colR two-component system regulatory proteinchromosome CDS938677 747 + 0.637216
colR two-component system regulatory proteinchromosome CDS3680677 678 - 0.634218
creB two-component system regulatory proteinchromosome CDS3193226 696 - 0.70546
cspA major cold shock proteinchromosome CDS1656438 216 + 0.569444
cspA major cold shock proteinchromosome CDS2689418 210 - 0.6
cysB transcriptional regulator lysR familychromosome CDS3777860 981 - 0.688073
dbpA ATP-dependent RNA helicasechromosome CDS2683748 1377 + 0.672476
deaD ATP-dependent RNA helicasechromosome CDS3133068 1929 - 0.687403
dinG ATP-dependent helicasechromosome CDS4678394 2136 - 0.674157
dnrO repressorchromosome CDS2733448 1020 - 0.732353
fecI RNA polymerase sigma factorchromosome CDS4284664 510 + 0.701961
fis DNA-binding proteinchromosome CDS614868 273 - 0.626374
fldY transcriptional regulatorchromosome CDS4778217 1263 - 0.733967
flgM flagellar proteinchromosome CDS2289153 312 + 0.628205
fliA RNA polymerase sigma factorchromosome CDS2229977 768 - 0.666667
gacA transcriptional regulator luxR/uhpA familychromosome CDS2458773 648 - 0.621914
gbpR galactose-binding protein regulatorchromosome CDS2023412 972 + 0.684156
glpR glycerol-3-phosphate regulon repressorchromosome CDS434097 780 - 0.678205
greA putative transcriptional elongation factorchromosome CDS2147236 477 + 0.639413
greB transcription elongation factor and transcript cleavagechromosome CDS3039625 507 + 0.660749
hrcA heat-inducible transcriptional repressorchromosome CDS1718919 1110 + 0.683784
hrpG HrpG proteinchromosome CDS1357619 789 - 0.626109
hrpXct HrpX proteinchromosome CDS1359230 1431 + 0.661775
hutC histidine utilization repressorchromosome CDS1851267 738 + 0.678862
icfG IcfG proteinchromosome CDS4315333 2082 - 0.685399
kdgR transcriptional regulatorchromosome CDS4832684 750 + 0.692
kdpE two-component system regulatory proteinchromosome CDS851457 717 + 0.677824
lexA LexA repressorchromosome CDS1275494 606 + 0.70132
lexA LexA repressorchromosome CDS1999263 642 + 0.67757
lrp leucine responsive regulatory proteinchromosome CDS4349705 480 + 0.620833
mdcY transcriptional regulator mdcY familychromosome CDS4311881 720 + 0.659722
mecI methicillin resistance proteinchromosome CDS54813 387 + 0.671835
metR transcriptional regulator metE/metH familychromosome CDS386402 906 - 0.646799
mfd transcription-repair coupling factorchromosome CDS3196467 3468 + 0.664648
nusA N utilization substance protein Achromosome CDS2985804 1512 - 0.642857
nusB transcription termination factor NusBchromosome CDS839706 480 + 0.658333
nusG transcription antitermination factorchromosome CDS1038441 558 + 0.611111
oxyR oxidative stress transcriptional regulatorchromosome CDS989401 942 - 0.644374
oxyR hydrogen peroxide-inducible genes activator proteinchromosome CDS1731488 900 - 0.683333
paiB transcriptional regulator protein Pai2chromosome CDS1819868 639 - 0.661972
parB chromosome partitioning proteinchromosome CDS4573022 930 + 0.691398
pcaQ transcriptional regulatorchromosome CDS964654 1002 + 0.667665
pcaR transcriptional regulatorchromosome CDS446083 861 - 0.707317
phoB two-component system regulatory proteinchromosome CDS1122312 690 - 0.669565
phoP two-component system regulatory proteinchromosome CDS4671999 684 - 0.612573
pobR PobR regulatorchromosome CDS426627 897 - 0.672241
prpR propionate catabolism regulatory proteinchromosome CDS1177221 1602 - 0.69226
psrA transcriptional regulator tetR familychromosome CDS2326588 633 - 0.666667
rbcR transcriptional regulatorchromosome CDS295391 957 - 0.649948
recG ATP-dependent DNA helicasechromosome CDS3846693 2142 - 0.693744
regR two-component system regulatory proteinchromosome CDS2069153 576 - 0.689236
relA ATP:GTP 3'-pyrophosphotranferasechromosome CDS3490114 2172 - 0.692449
rfaY RNA polymerase ECF-type sigma factorchromosome CDS3135169 501 + 0.658683
rfaY RNA polymerase sigma factorchromosome CDS1329943 1203 - 0.680798
rhlE ATP-dependent RNA helicasechromosome CDS710483 1389 - 0.688985
rhlE ATP-dependent RNA helicasechromosome CDS517880 1293 - 0.694509
rho transcription termination factor Rhochromosome CDS4490489 1281 + 0.623731
rnc ribonuclease IIIchromosome CDS1490433 681 + 0.662261
rnk regulator of nucleoside diphosphate kinasechromosome CDS988741 408 - 0.678922
rpfD regulatory proteinchromosome CDS2154352 918 + 0.667756
rpfG response regulatorchromosome CDS2158339 1137 + 0.639402
rpoA RNA polymerase alpha subunitchromosome CDS1068246 999 + 0.621622
rpoB RNA polymerase beta subunitchromosome CDS1042071 4164 + 0.622959
rpoC RNA polymerase beta' subunitchromosome CDS1046335 4218 + 0.632053
rpoD RNA polymerase sigma-70 factorchromosome CDS4442015 1875 - 0.613867
rpoE RNA polymerase sigma factorchromosome CDS1552666 564 - 0.663121
rpoE RNA polymerase sigma-E factorchromosome CDS1939230 582 - 0.640893
rpoH RNA polymerase sigma-32 factorchromosome CDS4483068 876 - 0.619863
rpoN RNA polymerase sigma-54 factorchromosome CDS2268589 1404 - 0.682336
rpoN RNA polymerase sigma-54 factorchromosome CDS3307871 1437 + 0.677105
rpoZ RNA polymerase omega subunitchromosome CDS3861320 300 - 0.626667
salR sal operon transcriptional repressorchromosome CDS4874264 1086 - 0.662063
salR transcriptional regulator lacI familychromosome CDS3738917 1050 + 0.673333
scoF cold shock proteinchromosome CDS1503104 207 + 0.608696
slyA transcriptional regulator for cryptic hemolysinchromosome CDS4973010 444 + 0.707207
soxR transcriptional regulator soxR familychromosome CDS3344009 447 - 0.695749
spoT pentaphosphate guanosine-3'-pyrophosphohydrolasechromosome CDS3859007 2172 - 0.64825
tcsR two-component system regulatory proteinchromosome CDS4819053 669 + 0.653214
tctD two-component system regulatory proteinchromosome CDS3991989 702 - 0.65812
tex transcription-related proteinchromosome CDS2542320 2364 - 0.675127
trpI transcriptional regulatorchromosome CDS3017917 897 + 0.733556
uidR transcriptional regulator uid familychromosome CDS1239238 630 - 0.634921
umuD polymerase V subunitchromosome CDS3523920 480 + 0.645833
vacB RNase Rchromosome CDS1774917 2424 + 0.648102
vanR transcriptional regulator gntR familychromosome CDS962402 675 - 0.671111
wxcB kinasechromosome CDS724009 2295 + 0.571678
xylR xylose repressor-like proteinchromosome CDS63652 1158 + 0.7038
ybhD transcriptional regulatorchromosome CDS4033025 915 - 0.621858
ygiX two-component system regulatory proteinchromosome CDS4622747 666 + 0.666667
yoaA ATP-dependent helicasechromosome CDS3480746 2007 - 0.67713
yybA transcriptional regulator marR familychromosome CDS1628060 444 + 0.675676
 
Xanthomonas campestris pv. vesicatoria str. 85-10, 85-10
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA XCV0681 putative DNA binding proteinchromosome CDS772663 1143 + 0.656168
NA XCV0887 two-component system regulatory proteinchromosome CDS1017999 714 + 0.645658
NA XCV4252 transcriptional regulator, LysR familychromosome CDS4882279 1305 - 0.708046
NA XCV2314 transcriptional regulator, ArsR familychromosome CDS2646915 684 + 0.659357
NA XCV2621 putative DNA-binding proteinchromosome CDS2954835 234 + 0.619658
NA XCV1781 putative transcriptional regulator, LysR familychromosome CDS2003902 945 + 0.689947
NA XCV0063 putative protein kinasechromosome CDS75934 756 - 0.443122
NA XCV0151 transcriptional regulator, LacI familychromosome CDS180741 1059 + 0.686497
NA XCV3312 putative transcriptional regulator, AraC familychromosome CDS3790294 912 - 0.679825
NA XCV1253 two-component system regulatory proteinchromosome CDS1413625 759 + 0.664032
NA XCV2997 transcriptional regulator, LysR familychromosome CDS3407445 915 + 0.688525
NA XCV4332 transcriptional regulator, LacI familychromosome CDS4978986 1074 - 0.663873
NA XCV4054 transcriptional regulator, TetR familychromosome CDS4654657 648 + 0.662037
NA XCV0061 putative transcriptional regulator, LysR familychromosome CDS72385 345 + 0.626087
NA XCV4146 putative DNA binding proteinchromosome CDS4747378 201 - 0.597015
NA XCV0542 transcriptional regulator, LysR familychromosome CDS607463 1002 - 0.678643
NA XCV0769 transcriptional regulator, LacI familychromosome CDS876001 1068 + 0.661049
NA XCV2015 putative two-component response regulatorchromosome CDS2296968 384 - 0.585938
NA XCV2300 conserved hypothetical proteinchromosome CDS2634688 294 + 0.588435
NA XCV3157 putative PspA/IM30 family proteinchromosome CDS3579394 774 - 0.666667
NA XCVd0141 DNA helicasepXCV183 CDS147733 2028 - 0.627712
NA XCV1604 putative transcriptional regulator, ArsR familychromosome CDS1811968 996 - 0.673695
NA XCV0606 putative regulatory proteinchromosome CDS684471 2109 - 0.682788
NA XCV1199 transcriptional regulator, TetR familychromosome CDS1340893 777 - 0.643501
NA XCV3884 transcriptional regulator, LysR familychromosome CDS4471403 927 - 0.667745
NA XCV2174 transcriptional regulator, LysR familychromosome CDS2499111 906 + 0.653422
NA XCV3880 transcriptional regulator, LysR familychromosome CDS4467483 1062 - 0.646893
NA XCV1347 putative transcriptional regulatorchromosome CDS1512551 696 + 0.704023
NA XCV3828 transcriptional regulator, LysR familychromosome CDS4413133 897 + 0.684504
NA XCV0327 transcriptional regulator, MerR familychromosome CDS375066 453 - 0.660044
NA XCV0919 transcriptional regulator, MarR familychromosome CDS1049207 474 - 0.687764
NA XCV1858 putative transcriptional regulator, AraC familychromosome CDS2092563 924 + 0.613636
NA XCV4220 putative protein kinasechromosome CDS4845240 2502 - 0.695044
NA XCV1117 conserved hypothetical proteinchromosome CDS1248208 930 + 0.577419
NA XCV2337 transcriptional regulator, ArsR familychromosome CDS2668664 354 + 0.621469
NA XCV0138 putative transcriptional regulator, MarR familychromosome CDS160354 489 - 0.635992
NA XCV2141 protein kinasechromosome CDS2455946 2904 + 0.694559
NA XCV3112 BolA superfamily transcriptional regulatorchromosome CDS3531517 258 - 0.639535
NA XCV4290 transcriptional regulator, IclR familychromosome CDS4923868 750 + 0.685333
NA XCV0203 conserved hypothetical proteinchromosome CDS239816 543 + 0.657459
NA XCV1499 transcriptional regulator, MarR familychromosome CDS1690119 450 + 0.664444
NA XCV3083 acetyltransferase (GNAT) family proteinchromosome CDS3505699 540 + 0.642593
NA XCV1598 transcriptional regulator, LacI familychromosome CDS1803096 1176 + 0.670068
NA XCV3589 transcriptional regulator, TetR familychromosome CDS4122387 654 + 0.642202
NA XCV2449 transcriptional regulator, AraC familychromosome CDS2781544 846 + 0.670213
NA XCV0158 transcriptional regulator, AsnC familychromosome CDS188272 483 + 0.681159
NA XCV3162 conserved hypothetical proteinchromosome CDS3583485 255 + 0.65098
NA XCV4213 transcriptional regulator, LysR familychromosome CDS4838041 903 + 0.660022
NA XCV1654 putative two-component response regulator, LuxR familychromosome CDS1864564 711 + 0.596343
NA XCV2788 transcriptional regulator, MerR familychromosome CDS3168763 357 - 0.619048
NA XCV4448 acetyltransferase (GNAT) family proteinchromosome CDS5133313 558 + 0.646953
NA XCV4206 putative protein kinasechromosome CDS4825314 3696 - 0.707522
NA XCV3807 putative secreted proteinchromosome CDS4392441 576 + 0.666667
NA XCV2299 transcriptional regulator, LysR familychromosome CDS2633942 642 - 0.630841
NA XCV2264 hypothetical proteinchromosome CDS2596058 909 - 0.639164
NA XCV1656 transcriptional regulator, PaiB familychromosome CDS1865611 636 - 0.643082
NA XCV2189 transcriptional regulator, AraC familychromosome CDS2519052 735 + 0.639456
NA XCV1925 conserved hypothetical proteinchromosome CDS2177564 249 + 0.674699
NA XCV2412 conserved hypothetical proteinchromosome CDS2736344 1656 - 0.67814
NA XCV0263 transcriptional regulator, LysR familychromosome CDS303367 957 - 0.635319
NA XCV1196 putative serine/threonine protein kinasechromosome CDS1338223 1554 - 0.636422
NA XCV0481 transcriptional regulator, MarR familychromosome CDS546215 489 - 0.654397
NA XCV3005 transcriptional regulator, TetR familychromosome CDS3418561 621 + 0.63285
NA XCV2086 transcriptional regulator, AraC familychromosome CDS2377208 1083 + 0.689751
NA XCV2422 two-component system response regulator, LuxR familychromosome CDS2746027 648 + 0.592593
NA XCV3608 two-component system response regulator, LuxR familychromosome CDS4148954 639 - 0.657277
NA XCV2675 transcriptional regulator, TetR familychromosome CDS3024425 660 + 0.657576
NA XCV1100 putative transcriptional regulator, XRE familychromosome CDS1234982 357 + 0.591036
NA XCV4403 transcriptional regulator, MarR familychromosome CDS5077742 453 + 0.684327
NA XCV2511 transcriptional regulator, LacI familychromosome CDS2836361 1023 - 0.69697
NA XCV0119 putative transcriptional regulatorchromosome CDS135110 3348 - 0.675926
NA XCV0260 putative transcriptional regulator, AraC familychromosome CDS300878 729 - 0.677641
NA XCV0915 transcriptional regulator LysR familychromosome CDS1043920 1002 + 0.670659
NA XCV3573 putative transcriptional regulator, AraC familychromosome CDS4094908 894 - 0.628635
NA XCV4086 two-component system response regulator, LuxR familychromosome CDS4681478 618 - 0.674757
NA XCV3284 acetyltransferase (GNAT) family proteinchromosome CDS3750287 528 - 0.640152
NA XCV1696 transcriptional regulator, LysR familychromosome CDS1911241 1017 + 0.662734
NA XCV3377 conserved hypothetical proteinchromosome CDS3862759 312 + 0.612179
NA XCV2301 transcriptional regulator, LysR familychromosome CDS2634988 891 - 0.585859
NA XCV2187 two-component system regulatory protein, LuxR familychromosome CDS2515120 642 - 0.679128
NA XCV3188 transcriptional regulator, TetR familychromosome CDS3623434 651 - 0.642089
NA XCV0325 transcriptional regulator, LysR familychromosome CDS372784 888 - 0.682432
NA XCV2636 putative transcriptional regulatorchromosome CDS2971694 1071 - 0.705882
NA XCV4461 transcriptional regulator, LysR familychromosome CDS5143466 933 + 0.709539
NA XCV2482 putative transcriptional regulator, LuxR familychromosome CDS2801007 1029 + 0.567541
NA XCV2151 putative two-component response regulator proteinchromosome CDS2470421 615 + 0.64878
NA XCV0556 putative transcriptional regulator, Fis familychromosome CDS624283 273 - 0.641026
NA XCV2516 conserved hypothetical proteinchromosome CDS2839525 1272 + 0.666667
NA XCV0329 SIR2-like regulatory proteinchromosome CDS376762 903 + 0.674419
NA XCV0796 conserved hypothetical proteinchromosome CDS908559 525 + 0.638095
NA XCV0051 putative transcriptional regulator, ROK familychromosome CDS60846 1293 + 0.668213
NA XCV0912 transcriptional regulator, GntR familychromosome CDS1041679 675 - 0.663704
NA XCV0935 putative transcriptional regulator, LuxR familychromosome CDS1063363 708 - 0.690678
NA XCV2415 putative regulatory protein, AlpA familychromosome CDS2739142 213 - 0.610329
NA XCV3587 transcriptional regulator, LysR familychromosome CDS4118040 885 + 0.674576
NA XCV2446 putative transcriptional regulator, ArsR familychromosome CDS2779533 348 + 0.600575
NA XCV1904 putative aminotransferasechromosome CDS2149741 1377 + 0.663036
NA XCV2036 Negative regulator of flagellin synthesischromosome CDS2317913 312 + 0.628205
NA XCV0045 putative penicillinase repressor family proteinchromosome CDS52209 387 + 0.671835
NA XCV2949 putative transcriptional regulator, ArsR familychromosome CDS3354895 315 + 0.631746
NA XCV2749 transcriptional regulator, AraC familychromosome CDS3129419 717 + 0.642957
NA XCV2153 two-component response regulatorchromosome CDS2474118 645 + 0.631008
NA XCV2796 transcriptional regulator, LacI familychromosome CDS3176807 1122 + 0.66221
NA XCV0334 two-component system response regulatorchromosome CDS381567 684 - 0.695906
NA XCV3615 transcriptional regulator, LacI familychromosome CDS4157039 1032 + 0.670543
NA XCV2964 putative two-component system regulatory proteinchromosome CDS3370270 690 + 0.650725
NA XCV3547 conserved hypothetical proteinchromosome CDS4063388 729 - 0.685871
NA XCV0046 BlaR1 peptidase M56 family membrane proteinchromosome CDS52599 1740 + 0.697126
NA XCV0797 putative acetyltransferasechromosome CDS909080 489 + 0.660532
NA XCV4276 two-component system response regulator, LuxR familychromosome CDS4910898 669 + 0.657698
NA XCV3839 putative two-component system response regulator, LytR/AlgR familychromosome CDS4424183 777 - 0.682111
NA XCV0859 putative transcriptional regulator, TetR familychromosome CDS982814 645 + 0.668217
NA XCV3571 putative two-component system response regulatorchromosome CDS4090484 1116 + 0.677419
NA XCV4068 two-component system regulatory proteinchromosome CDS4665774 666 + 0.644144
NA XCV0503 putative N-acetyltransferasechromosome CDS568095 492 + 0.686992
NA XCV4244 putative transcriptional regulator, AraC familychromosome CDS4873456 672 + 0.66369
NA XCV1591 transcriptional regulator, GntR familychromosome CDS1797064 363 - 0.608815
NA XCV2619 conserved hypothetical proteinchromosome CDS2953247 276 + 0.615942
NA XCV0019 conserved hypothetical proteinchromosome CDS20064 714 - 0.635854
NA XCV3738 putative regulatory protein, TfoX familychromosome CDS4318914 384 + 0.671875
NA XCV2323 transcriptional regulator, LysR familychromosome CDS2654679 885 + 0.624859
NA XCV0464 transcriptional regulator, TetR familychromosome CDS524311 618 + 0.624595
NA XCV1498 transcriptional regulator, AraC familychromosome CDS1689154 852 - 0.711268
NA XCV0044 transcriptional regulator, LysR familychromosome CDS51118 888 + 0.667793
NA XCV3604 transcriptional regulator, LysR familychromosome CDS4145565 903 - 0.65227
NA XCV0558 transcriptional regulator, XRE familychromosome CDS626359 378 - 0.687831
NA XCV1211 conserved hypothetical proteinchromosome CDS1356453 639 + 0.654147
NA XCV2669 conserved hypothetical proteinchromosome CDS3009326 885 + 0.672316
NA XCV2620 putative DNA-binding proteinchromosome CDS2953547 795 + 0.544654
NA XCV3000 transcriptional regulator, LysR familychromosome CDS3410767 930 + 0.651613
NA XCV3078 putative transcriptional regulator, Rrf2 familychromosome CDS3500175 459 + 0.662309
NA XCV3017 N-acetyltransferase family proteinchromosome CDS3431019 543 + 0.657459
NA XCV0646 putative transcriptional regulator, Rrf2 familychromosome CDS731132 474 + 0.679325
NA XCV3001 transcriptional regulator, TetR familychromosome CDS3411873 681 - 0.662261
NA XCV3959 transcriptional regulator, LysR familychromosome CDS4544612 945 - 0.669841
NA XCV1798 transcriptional regulator, LysR familychromosome CDS2018255 972 + 0.665638
NA XCV0311 transcriptional regulator, LysR familychromosome CDS355084 1005 - 0.661692
NA XCV1572 transcriptional regulator, LysR familychromosome CDS1773554 900 - 0.67
NA XCV0628 transcriptional regulator, AraC familychromosome CDS709337 1068 + 0.643258
NA XCV2549 putative GNAT family acetyltransferasechromosome CDS2876946 453 - 0.640177
NA XCV2293 conserved hypothetical proteinchromosome CDS2627507 1644 - 0.644161
NA XCV2219 conserved hypothetical proteinchromosome CDS2551436 249 + 0.634538
NA XCV1512 transcriptional regulator, MarR familychromosome CDS1705411 501 + 0.602794
NA XCV0933 two-component system regulatory proteinchromosome CDS1060995 465 - 0.647312
NA XCV2182 putative transcriptional regulator, AraC familychromosome CDS2509612 900 - 0.661111
NA XCV1704 transcriptional regulator, MarR familychromosome CDS1921400 792 - 0.680556
NA XCV4344 transcriptional regulator, TetR familychromosome CDS4995543 918 - 0.675381
NA XCV3536 transcriptional regulator, LuxR familychromosome CDS4049379 2772 + 0.669192
NA XCV2164 putative regulatory protein, AlpA familychromosome CDS2485467 201 + 0.562189
NA XCV0258 transcriptional regulator, TetR familychromosome CDS299668 633 + 0.665087
NA XCV0767 transcriptional regulator, GntR familychromosome CDS873872 768 + 0.674479
NA XCV4432 putative transcriptional regulator, TetR familychromosome CDS5107274 570 - 0.621053
NA XCV0364 transcriptional regulator, MarR familychromosome CDS416361 531 + 0.691149
NA XCV0274 transcriptional regulator, TetR familychromosome CDS320632 621 + 0.674718
NA XCV1362 putative DNA-binding proteinchromosome CDS1539091 1386 - 0.686869
NA XCV2697 transcriptional regulator, AsnC familychromosome CDS3054105 432 - 0.678241
NA XCV2346 transcriptional regulator, AraC familychromosome CDS2677528 843 - 0.688019
NA XCV0715 sigma-54-dependent transcriptional regulatorchromosome CDS812005 1986 - 0.694864
NA XCVd0077 putative transcriptional regulator, LuxR familypXCV183 CDS85900 789 + 0.628644
NA XCV1261 two-component system regulatory proteinchromosome CDS1420283 642 + 0.643302
NA XCV2386 putative helicasechromosome CDS2714086 2280 - 0.64386
NA XCV1182 putative transcriptional regulator, TetR familychromosome CDS1321979 591 + 0.717428
NA XCV4471 sugar diacid utilization regulatorchromosome CDS5156634 1191 - 0.70445
NA XCV0350 conserved hypothetical proteinchromosome CDS402408 501 + 0.658683
NA XCV2144 transcriptional regulator, LysR familychromosome CDS2460378 972 - 0.669753
NA XCV2483 putative regulatory protein, AlpA familychromosome CDS2802139 246 + 0.597561
NA XCV2017 two-component system response regulator, LuxR familychromosome CDS2298980 666 - 0.654655
NA XCV3896 transcriptional regulator, LysR familychromosome CDS4480553 924 - 0.638528
NA XCV0784 two-component system regulatory protein, OmpR familychromosome CDS897458 780 - 0.657692
NA XCV3063 conserved hypothetical proteinchromosome CDS3487405 567 - 0.657848
NA XCV3427 transcriptional regulator, LacI familychromosome CDS3911951 1053 + 0.666667
NA XCV1538 transcriptional regulator, LysR familychromosome CDS1735053 1035 - 0.623188
NA XCV0115 two-component system regulatory proteinchromosome CDS132112 633 + 0.687204
NA XCV4433 putative transcriptional regulator, TetR familychromosome CDS5107960 633 - 0.672986
NA XCV2178 transcriptional regulator, LysR familychromosome CDS2505690 891 + 0.662177
NA XCV1455 putative transcriptional regulator, PadR-like familychromosome CDS1635727 363 + 0.658402
NA XCV2431 putative transcriptional regulator, TetR familychromosome CDS2759066 570 - 0.659649
NA XCV0593 putative transcriptional regulator, PadR-like familychromosome CDS673320 537 - 0.672253
NA XCV3010 conserved hypothetical proteinchromosome CDS3423608 666 - 0.647147
NA XCV2948 transcriptional regulator, LysR familychromosome CDS3353589 993 + 0.669688
NA XCV1186 conserved hypothetical proteinchromosome CDS1326871 531 + 0.6629
NA XCV3656 transcriptional regulator, GntR familychromosome CDS4210847 729 + 0.658436
NA XCV2065 transcriptional regulator, TetR familychromosome CDS2355640 633 - 0.663507
NA XCV3135 transcriptional regulator, LuxR familychromosome CDS3554709 765 - 0.64183
NA XCV2184 transcriptional regulator, LysR familychromosome CDS2511940 924 + 0.664502
NA XCV0321 transcriptional regulator, LysR familychromosome CDS368559 918 + 0.688453
NA XCVd0089 conserved hypothetical proteinpXCV183 CDS98928 612 - 0.602941
NA XCV4109 putative transcriptional regulator, Bvg accessory factor familychromosome CDS4704298 729 - 0.718793
NA XCV0732 transcriptional regulator, LysR familychromosome CDS835201 906 + 0.709713
NA XCV2998 transcriptional regulator, AraC familychromosome CDS3409108 909 + 0.649065
NA XCV2672 two-component system response regulatorchromosome CDS3016015 987 + 0.665653
NA XCV2210 putative membrane proteinchromosome CDS2540089 198 + 0.60101
NA XCV2335 transcriptional regulator, MerR familychromosome CDS2665500 480 - 0.63125
NA XCV4373 transcriptional regulator, LacI familychromosome CDS5031144 1053 + 0.698955
algR XCV0678 two-component system regulatory proteinchromosome CDS769597 738 + 0.674797
ampR XCV3294 transcriptional regulator, LysR familychromosome CDS3763814 876 + 0.699772
blaI XCV3481 BlaI transcriptional regulatorchromosome CDS3984198 456 - 0.614035
blaR1 XCV3479 putative BlaR1 antirepressor (fragment)chromosome CDS3982910 822 - 0.656934
colR XCV3365 two-component system regulatory proteinchromosome CDS3853636 678 - 0.634218
creB XCV3015 two-component system regulatory proteinchromosome CDS3428858 705 - 0.699291
cspA XCV1522 major cold shock proteinchromosome CDS1718213 216 + 0.546296
cspA XCV2592 major cold shock proteinchromosome CDS2921453 210 - 0.628571
cysB XCV3457 transcriptional regulator, LysR familychromosome CDS3959075 984 - 0.684959
dbpA XCV2587 ATP-dependent RNA helicasechromosome CDS2915525 1377 + 0.668119
deaD XCV2974 ATP-dependent RNA helicasechromosome CDS3383466 1947 - 0.681048
dinG XCV4123 ATP-dependent helicasechromosome CDS4718378 2136 - 0.659644
dotC XCVd0006 putative DotC-like type IV secretion system proteinpXCV183 CDS7068 780 + 0.602564
fliA XCV1977 RNA polymerase sigma factor for flagellar operon FliAchromosome CDS2251433 768 - 0.670573
fruR XCV2678 transcriptional regulator, LacI familychromosome CDS3029935 1125 - 0.667556
gcvA XCV2354 transcriptional regulator, LysR familychromosome CDS2683692 936 + 0.666667
glpR XCV0375 transcriptional regulator, DeoR familychromosome CDS428514 963 - 0.668743
greA XCV1910 transcriptional elongation factorchromosome CDS2158277 477 + 0.616352
greB XCV2886 transcription elongation factorchromosome CDS3281761 507 + 0.65286
hrcA XCV1562 heat-inducible transcriptional repressorchromosome CDS1760916 1053 + 0.683761
hrpG XCV1314 transcriptional regulator HrpGchromosome CDS1473306 792 - 0.628788
hrpXv XCV1315 AraC-type transcriptional regulator HrpXchromosome CDS1474927 1431 + 0.655486
hutC XCV1682 transcriptional regulator, GntR familychromosome CDS1897012 738 + 0.674797
iciA XCV3264 transcriptional regulator, LysR familychromosome CDS3732566 903 + 0.663344
kdkA XCV1103 3-deoxy-D-manno-octulosonic acid kinasechromosome CDS1237409 750 + 0.676
kdpE XCV0812 two-component system response regulator KdpEchromosome CDS927458 717 + 0.670851
lexA1 XCV1223 LexA repressorchromosome CDS1368398 606 + 0.673267
lexA2 XCV1772 LexA repressorchromosome CDS1993650 642 + 0.641745
lrp XCV3810 Leucine-responsive regulatory protein, AsnC familychromosome CDS4395785 480 + 0.6375
lytT XCV2112 two-component system regulatory proteinchromosome CDS2423098 723 + 0.625173
mdcY XCV0602 transcriptional repressor MdcY, GntR familychromosome CDS681881 753 + 0.665339
metR XCV0342 transcriptional regulator, LysR familychromosome CDS393832 915 - 0.659016
mfd XCV3018 transcription-repair coupling factorchromosome CDS3431975 3465 + 0.662049
mntR XCV2198 manganese-dependent transcriptional regulator, MarR familychromosome CDS2528267 510 + 0.696078
nusA XCV2838 N utilization substance (transcription elongation) protein Achromosome CDS3229262 1512 - 0.641534
nusB XCV0803 transcription termination factor NusBchromosome CDS914445 489 + 0.680982
nusG XCV0986 transcription antitermination factorchromosome CDS1116740 558 + 0.602151
ohrR XCV0289 transcriptional regulator, MarR familychromosome CDS335231 462 + 0.647186
oxyR XCV0941 transcriptional regulator, LysR familychromosome CDS1068756 942 - 0.630573
parB XCVd0003 Chromosome partitioning proteinpXCV183 CDS3543 882 - 0.637188
parB XCV4019 chromosome partitioning proteinchromosome CDS4616273 930 + 0.691398
pcaR XCV0387 transcriptional regulator, IclR familychromosome CDS440741 909 - 0.69637
phoB XCV1072 two-component system regulatory proteinchromosome CDS1204045 690 - 0.662319
phoP XCV4116 two-component system regulatory proteinchromosome CDS4712017 684 - 0.611111
pobR XCV0368 transcriptional regulator PobR, AraC familychromosome CDS420637 912 - 0.658991
prpR XCV1155 Propionate catabolism regulatory proteinchromosome CDS1282984 1650 - 0.664242
ptrR XCV4081 Transmembrane regulatory proteinchromosome CDS4677182 753 - 0.703851
qseB XCV2309 two-component system regulatory proteinchromosome CDS2642714 669 + 0.636771
recG XCV3508 ATP-dependent DNA helicasechromosome CDS4019756 2154 - 0.677345
recG XCV2169 ATP-dependent DNA helicasechromosome CDS2494409 1176 + 0.619898
regR XCV1827 two-component system regulatory proteinchromosome CDS2064376 567 - 0.64903
relA XCV3244 Guanosine 3',5'-bis-pyrophosphate synthetasechromosome CDS3705275 2172 - 0.678637
repB XCVd0002 Replication protein BpXCV183 CDS1745 999 + 0.602603
rfaY XCV1276 RNA polymerase ECF-type sigma factorchromosome CDS1433241 1194 - 0.679229
rhlB XCV3954 ATP-dependent RNA helicasechromosome CDS4537342 1722 - 0.680604
rhlE XCV0470 ATP-dependent RNA helicasechromosome CDS531139 1362 - 0.687959
rhlE XCV3733 ATP-dependent RNA helicasechromosome CDS4314998 1389 + 0.689705
rho XCV3956 transcription termination factor Rhochromosome CDS4540431 1263 + 0.629454
rnc XCV1376 ribonuclease IIIchromosome CDS1556538 681 + 0.656388
rnk XCV0940 regulator of nucleoside diphosphate kinasechromosome CDS1067818 441 - 0.678005
rpfD XCV1914 AlgR/AgrA/LytR family regulatory protein RpfDchromosome CDS2162874 885 + 0.671186
rpfG XCV1917 two-component system response regulator RpfGchromosome CDS2166993 1137 + 0.645558
rpoA XCV1023 DNA directed RNA polymerase (alpha subunit)chromosome CDS1148113 999 + 0.61962
rpoB XCV0991 DNA directed RNA polymerase (beta subunit)chromosome CDS1120414 4152 + 0.624759
rpoC XCV0992 DNA directed RNA polymerase (beta' subunit)chromosome CDS1124666 4215 + 0.633689
rpoD XCV3912 RNA polymerase sigma-70 factorchromosome CDS4490897 1878 - 0.611821
rpoE1 XCV0954 RNA polymerase ECF-type sigma factorchromosome CDS1082892 849 - 0.656066
rpoE2 XCV1370 RNA polymerase ECF-type sigma factorchromosome CDS1550053 621 + 0.628019
rpoE3 XCV1436 RNA polymerase ECF-type sigma factorchromosome CDS1615074 564 - 0.661348
rpoE4 XCV1718 RNA polymerase ECF-type sigma factorchromosome CDS1937085 594 - 0.658249
rpoE5 XCV2975 RNA polymerase ECF-type sigma factorchromosome CDS3385363 669 + 0.647235
rpoE6 XCV3224 RNA polymerase ECF-type sigma factorchromosome CDS3675598 531 + 0.638418
rpoE7 XCV4082 RNA polymerase ECF-type sigma factorchromosome CDS4677931 537 - 0.67784
rpoE8 XCV4221 RNA polymerase ECF-type sigma factorchromosome CDS4847738 567 - 0.687831
rpoE9 XCV4222 RNA polymerase ECF-type sigma factor, FecI familychromosome CDS4848627 528 + 0.666667
rpoH XCV3949 RNA polymerase sigma-32 factorchromosome CDS4532987 885 - 0.629379
rpoN1 XCV2016 RNA polymerase sigma-54 factorchromosome CDS2297360 1404 - 0.670228
rpoN2 XCV3118 RNA polymerase sigma-54 factorchromosome CDS3535308 1398 + 0.689557
rpoZ XCV3511 RNA polymerase omega subunitchromosome CDS4024689 300 - 0.63
scoF XCV1389 cold shock proteinchromosome CDS1569254 207 + 0.608696
soxR XCV3149 transcriptional regulator, MerR familychromosome CDS3572933 447 - 0.668904
spoT XCV3510 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolasechromosome CDS4022390 2172 - 0.64825
tctD XCV3611 two-component system regulatory proteinchromosome CDS4152229 702 - 0.656695
tex XCV2214 transcription-related proteinchromosome CDS2542463 2364 + 0.649746
trpI XCV2870 TrpBA operon transcriptional regulator, LysR familychromosome CDS3262560 927 + 0.699029
umuD XCV3904 putative polymerase V subunitchromosome CDS4485662 480 + 0.65
vacB XCV1607 RNase Rchromosome CDS1816737 2529 + 0.644128
virG XCV2147 VirG-like two-component system regulatory proteinchromosome CDS2464905 780 - 0.65
wxcB XCV3720 putative protein kinasechromosome CDS4298722 2148 - 0.586127
yoaA XCV3239 ATP-dependent helicasechromosome CDS3695648 1989 - 0.688286
 
Xanthomonas oryzae pv. oryzae KACC10331, KACC10331
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA XOO2864 conserved hypothetical proteinchromosome CDS3073776 273 - 0.619048
NA XOO0026 transcriptional regulatorchromosome CDS27068 339 - 0.663717
NA XOO0958 conserved hypothetical proteinchromosome CDS992210 525 + 0.634286
NA XOO1057 conserved hypothetical proteinchromosome CDS1082213 750 + 0.656
NA XOO4328 conserved hypothetical proteinchromosome CDS4608449 432 - 0.645833
NA XOO1191 TonB-like proteinchromosome CDS1218970 1335 + 0.662921
NA XOO0405 transcriptional regulator lysR familychromosome CDS411213 924 + 0.678571
NA XOO2162 conserved hypothetical proteinchromosome CDS2267559 1275 - 0.663529
NA XOO4358 transcriptional regulator, LysR familychromosome CDS4635425 426 + 0.607981
NA XOO4051 N-acetyltransferasechromosome CDS4338557 492 - 0.674797
NA XOO3033 unknown proteinchromosome CDS3257414 981 + 0.66157
NA XOO3857 acetyltransferasechromosome CDS4117346 486 - 0.62963
NA XOO1473 conserved hypothetical proteinchromosome CDS1518943 543 - 0.666667
NA XOO3180 conserved hypothetical proteinchromosome CDS3417183 357 - 0.616247
NA XOO1401 acetyltransferasechromosome CDS1434469 720 - 0.601389
NA XOO2586 response regulatorchromosome CDS2737247 633 + 0.64139
NA XOO3527 two-component system regulatory proteinchromosome CDS3796263 645 - 0.648062
NA XOO0386 transcriptional regulatorchromosome CDS389301 201 + 0.587065
NA XOO1657 acetyltransferasechromosome CDS1721304 1080 + 0.644444
NA XOO0859 putative transcriptional regulatorchromosome CDS880648 729 - 0.647462
NA XOO1406 conserved hypothetical proteinchromosome CDS1440257 459 - 0.642702
NA XOO2343 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homologchromosome CDS2484523 501 + 0.634731
NA XOO4005 conserved hypothetical proteinchromosome CDS4276285 966 - 0.632505
NA XOO3870 two-component system regulatory proteinchromosome CDS4132334 846 + 0.644208
NA XOO0550 transcriptional regulator pbsX familychromosome CDS572578 378 - 0.698413
NA XOO2932 transcriptional regulatorchromosome CDS3139973 945 - 0.692064
NA XOO3727 transcriptional regulator marR familychromosome CDS3982676 474 + 0.668776
NA XOO3142 transcriptional regulatorchromosome CDS3377655 729 + 0.618656
NA XOO4448 transcriptional regulator tetR familychromosome CDS4738459 681 + 0.662261
NA XOO2124 transcriptional regulatorchromosome CDS2219784 1014 + 0.662722
NA XOO1507 transcriptional regulatorchromosome CDS1539638 1434 - 0.658996
NA XOO2809 transcriptional regulator lacI familychromosome CDS2993635 975 - 0.673846
NA XOO4618 sugar diacide regulatorchromosome CDS4920252 891 - 0.667789
NA XOO3104 AraC-type DNA-binding domain-containing proteinschromosome CDS3328757 507 - 0.678501
NA XOO0929 transcriptional regulatorchromosome CDS960864 654 - 0.64526
NA XOO4348 transcriptional regulator merR familychromosome CDS4625876 207 + 0.642512
NA XOO2798 two-component system regulatory proteinchromosome CDS2974122 987 + 0.656535
NA XOO3920 transcriptional regulator gntR familychromosome CDS4182036 867 - 0.648212
NA XOO0312 acetyltransferasechromosome CDS322619 582 - 0.627148
NA XOO4350 transcriptional regulator lysR familychromosome CDS4627721 888 + 0.68018
NA XOO2803 transcriptional regulator tetR/acrR familychromosome CDS2985835 660 + 0.659091
NA XOO2345 transcriptional regulator marR familychromosome CDS2485855 501 - 0.568862
NA XOO3030 VirG-like two component response regulatorchromosome CDS3253076 780 + 0.652564
NA XOO3155 hypothetical proteinchromosome CDS3390063 819 - 0.665446
NA XOO2069 transcriptional regulatorchromosome CDS2171235 1194 + 0.640703
NA XOO1213 conserved hypothetical proteinchromosome CDS1240010 708 + 0.668079
NA XOO4072 transcriptional regulator marR/emrR familychromosome CDS4358254 489 + 0.656442
NA XOO1804 transcriptional regulatorchromosome CDS1898380 654 + 0.651376
NA XOO4455 transcriptional regulator marR familychromosome CDS4743944 459 + 0.633987
NA XOO2198 transcriptional regulator lysR familychromosome CDS2310910 948 + 0.637131
NA XOO3795 transcriptional regulator tetR/acrR familychromosome CDS4047411 699 - 0.678112
NA XOO2206 iron dependent repressorchromosome CDS2319457 552 + 0.655797
NA XOO4194 conserved hypothetical proteinchromosome CDS4471039 543 + 0.644567
NA XOO3710 two-component system regulatory proteinchromosome CDS3968159 474 + 0.64135
NA XOO0683 probable two-component response regulatorchromosome CDS706977 729 - 0.654321
NA XOO4380 transcriptional regulator acrR familychromosome CDS4655774 510 + 0.672549
NA XOO3035 serine/threonine kinasechromosome CDS3259927 2904 - 0.698347
NA XOO2075 transcriptional regulatorchromosome CDS2180356 996 - 0.670683
NA XOO2486 transcriptional regulator asnC/lrp familychromosome CDS2636319 432 - 0.664352
NA XOO0252 transcriptional regulator lacI familychromosome CDS269244 1053 - 0.683761
NA XOO4549 transcriptional regulatorchromosome CDS4848798 702 - 0.685185
NA XOO0532 transcriptional regulator lysR familychromosome CDS555161 342 - 0.678363
NA XOO2165 transcriptional regulator lacI familychromosome CDS2271500 735 + 0.678912
NA XOO1188 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domainchromosome CDS1216387 750 + 0.648
NA XOO2222 conserved hypothetical proteinchromosome CDS2335209 198 + 0.59596
NA XOO2588 response regulatorchromosome CDS2739515 381 + 0.580052
NA XOO4619 sugar diacide regulatorchromosome CDS4920323 576 - 0.663194
NA XOO3659 two-component system regulatory proteinchromosome CDS3917313 519 + 0.682081
NA XOO1109 transcriptional regulator luxR/uhpA familychromosome CDS1133582 639 + 0.665102
NA XOO4506 transcriptional regulatorchromosome CDS4805240 621 + 0.547504
NA XOO3918 transcriptional regulator lacI familychromosome CDS4179597 1104 - 0.644928
NA XOO2674 conserved hypothetical proteinchromosome CDS2836028 630 - 0.64127
NA XOO2029 Heat-inducible transcription repressor hrcAchromosome CDS2128312 1053 + 0.678063
NA XOO0949 transcriptional regulatorchromosome CDS981531 939 + 0.616613
NA XOO1997 transcriptional regulatorchromosome CDS2104505 852 - 0.698357
NA XOO2536 transcriptional regulator tetR familychromosome CDS2678394 633 + 0.64613
NA XOO4461 DNA-binding proteinchromosome CDS4749648 249 + 0.586345
NA XOO0268 transcriptional regulator asnC familychromosome CDS281649 633 + 0.630332
NA XOO3188 maltose transport gene repressorchromosome CDS3425306 93 + 0.602151
NA XOO0935 transcriptional regulator lysR familychromosome CDS964377 891 - 0.65881
NA XOO2063 transcriptional regulator gntR familychromosome CDS2165213 546 - 0.608059
NA XOO0190 transcriptional regulator lacI familychromosome CDS194802 1137 - 0.684257
NA XOO2045 conserved hypothetical proteinchromosome CDS2149270 933 - 0.681672
NA XOO1688 phage-related proteinchromosome CDS1749350 438 + 0.570776
NA XOO2344 hypothetical proteinchromosome CDS2485020 744 + 0.674731
NA XOO4219 transcriptional regulator MarR familychromosome CDS4498083 540 - 0.648148
NA XOO3020 unknown proteinchromosome CDS3240975 579 + 0.673575
NA XOO2202 unknown proteinchromosome CDS2314324 708 + 0.65113
NA XOO0600 unknown proteinchromosome CDS627664 852 + 0.597418
NA XOO1498 conserved hypothetical proteinchromosome CDS1533445 558 + 0.623656
NA XOO3631 ECF sigma factorchromosome CDS3891029 678 + 0.688791
NA XOO3858 conserved hypothetical proteinchromosome CDS4117828 576 - 0.618056
NA XOO1247 conserved hypothetical proteinchromosome CDS1276230 774 + 0.662791
acoK XOO1230 transcriptional regulatorchromosome CDS1251962 3018 - 0.656395
acoK XOO1231 transcriptional regulatorchromosome CDS1253367 513 - 0.654971
ahyR XOO1268 transcriptional regulator AhyR/AsaR familychromosome CDS1299056 834 + 0.61271
algH XOO1425 transcriptional regulatorchromosome CDS1454793 567 + 0.634921
algR XOO0651 transcriptional regulator proteinchromosome CDS673226 1308 + 0.673547
algR XOO4008 two-component system regulatory proteinchromosome CDS4280105 738 - 0.669377
algR XOO0653 transcriptional regulator proteinchromosome CDS674530 186 + 0.564516
algU XOO1849 RNA polymerase sigma-H factorchromosome CDS1950933 753 + 0.621514
ampR XOO1369 transcriptional activator ampR familychromosome CDS1403659 846 - 0.667849
ampR XOO4166 B-lactamase regulatory proteinchromosome CDS4442094 225 - 0.666667
avtA XOO2895 valine-pyruvate aminotransferasechromosome CDS3106412 1203 - 0.652535
baeR XOO1559 two-component system regulatory proteinchromosome CDS1591302 2334 - 0.651242
baf XOO0429 transcriptional regulatorchromosome CDS437057 729 + 0.713306
blaI XOO1190 transcriptional regulator blaI familychromosome CDS1218561 420 + 0.580952
cebR XOO1101 transcriptional regulatorchromosome CDS1125284 1221 - 0.657658
colR XOO3535 two-component system regulatory proteinchromosome CDS3802788 924 - 0.665584
colR XOO3763 two-component system regulatory proteinchromosome CDS4014766 624 - 0.663462
colR XOO1208 two-component system regulatory proteinchromosome CDS1233979 741 - 0.618084
cspA XOO2721 major cold shock proteinchromosome CDS2882175 366 - 0.551913
cspA XOO1510 major cold shock proteinchromosome CDS1543325 216 + 0.560185
cysB XOO3407 transcriptional regulator lysR familychromosome CDS3633921 984 - 0.666667
dbpA XOO2716 ATP-dependent RNA helicasechromosome CDS2876181 1449 + 0.665977
deaD XOO1550 ATP-dependent RNA helicasechromosome CDS1578167 1905 + 0.670341
dnrO XOO2764 repressorchromosome CDS2926373 969 - 0.712074
fis XOO0548 DNA-binding proteinchromosome CDS570643 273 - 0.619048
fldY XOO4566 transcriptional regulatorchromosome CDS4863212 1308 + 0.690367
flgM XOO2566 flagellar proteinchromosome CDS2718824 312 - 0.625
fliA XOO2621 RNA polymerase sigma factor FliAchromosome CDS2780864 756 + 0.649471
gacA XOO3077 transcriptional regulator luxR/uhpA familychromosome CDS3309787 720 - 0.598611
gbpR XOO2916 galactose-binding protein regulatorchromosome CDS3126254 1038 - 0.643545
greA XOO2886 transcriptional elongation factorchromosome CDS3098221 513 - 0.62768
greB XOO3271 transcription elongation factor and transcript cleavagechromosome CDS3507687 567 + 0.663139
hrpG XOO1379 HrpGchromosome CDS1411025 975 - 0.621538
hrpXct XOO1380 HrpX proteinchromosome CDS1412482 1527 + 0.639162
hutC XOO2395 histidine utilization repressorchromosome CDS2553277 738 - 0.666667
icfG XOO4263 IcfG proteinchromosome CDS4537768 2007 + 0.659193
kdgR XOO0338 transcriptional regulatorchromosome CDS350272 927 - 0.651564
kdpE XOO3842 two-component system regulatory proteinchromosome CDS4099676 783 - 0.65645
lexA XOO3442 LexA repressorchromosome CDS3678798 606 - 0.665016
lexA XOO2942 LexAchromosome CDS3151451 678 - 0.638643
lrp XOO0692 leucine responsive regulatory proteinchromosome CDS713242 480 - 0.63125
metR XOO4336 transcriptional regulator metE/metH familychromosome CDS4616519 843 + 0.648873
mfd XOO1472 transcription-repair coupling factorchromosome CDS1515075 3465 - 0.656854
nusA XOO3219 N utilization substance protein Achromosome CDS3458869 1512 - 0.638889
nusB XOO3851 transcription termination factor NusBchromosome CDS4112017 471 - 0.649682
nusG XOO3597 transcription antitermination factorchromosome CDS3860820 612 - 0.584967
oxyR XOO3647 oxidative stress transcriptional regulatorchromosome CDS3908948 942 + 0.633758
oxyR XOO2038 hydrogen peroxide-inducible genes activatorchromosome CDS2138975 606 - 0.669967
paiB XOO2422 transcriptional regulator protein Pai2chromosome CDS2583336 303 + 0.643564
paiB XOO2421 transcriptional regulator protein Pai2chromosome CDS2583000 324 + 0.638889
parB XOO0504 chromosome partitioning proteinchromosome CDS521916 930 - 0.684946
pcaQ XOO3731 transcriptional regulatorchromosome CDS3987441 1041 - 0.634006
pcaR XOO0488 transcriptional regulatorchromosome CDS506040 672 - 0.677083
phoB XOO3666 two-component system regulatory proteinchromosome CDS3922086 690 + 0.66087
phoP XOO0423 two-component system regulatory proteinchromosome CDS429367 684 + 0.593567
prpR XOO0891 propionate catabolism regulatory proteinchromosome CDS915609 1776 - 0.653716
prtI XOO0448 ECF sigma factorchromosome CDS455215 516 + 0.662791
prtR XOO0449 transmembrane regulator protein prtRchromosome CDS455727 753 + 0.677291
recG XOO1151 ATP-dependent DNA helicasechromosome CDS1173693 2154 + 0.661096
regR XOO2227 two-component system regulatory proteinchromosome CDS2341259 567 - 0.659612
relA XOO1736 ATP:GTP 3'-pyrophosphotranferasechromosome CDS1802201 2298 + 0.666667
rfaY XOO1548 RNA polymerase ECF-type sigma factorchromosome CDS1577520 543 - 0.633518
rfaY XOO1613 RNA polymerase sigma factorchromosome CDS1659017 780 - 0.667949
rhlB XOO4301 ATP-dependent RNA helicasechromosome CDS4577310 1944 - 0.672325
rhlE XOO0770 ATP-dependent RNA helicasechromosome CDS783828 1455 - 0.683849
rhlE XOO0133 ATP-dependent RNA helicasechromosome CDS134954 1290 - 0.686822
rho XOO4303 transcription termination factor Rhochromosome CDS4579791 1890 + 0.647619
rnc XOO1855 ribonuclease IIIchromosome CDS1957553 681 + 0.63583
rnk XOO3648 regulator of nucleoside diphosphate kinasechromosome CDS3909989 759 + 0.642951
rpfG XOO2871 response regulatorchromosome CDS3082872 1260 - 0.628571
rpoA XOO3558 RNA polymerase alpha subunitchromosome CDS3829155 999 - 0.61962
rpoB XOO3591 RNA polymerase beta subunitchromosome CDS3853543 4152 - 0.617534
rpoC XOO3590 RNA polymerase beta' subunitchromosome CDS3849175 4218 - 0.627549
rpoD XOO0598 RNA polymerase sigma-70 factorchromosome CDS622943 1890 + 0.609524
rpoE XOO3003 RNA polymerase sigma-E factorchromosome CDS3211965 594 + 0.648148
rpoE XOO1919 RNA polymerase sigma factorchromosome CDS2022254 1092 - 0.643773
rpoH XOO4296 RNA polymerase sigma-32 factorchromosome CDS4572954 990 - 0.606061
rpoN XOO1284 RNA polymerase sigma-54 factorchromosome CDS1316077 1500 - 0.660667
rpoN XOO2587 RNA polymerase sigma-54 factorchromosome CDS2738103 1404 + 0.669516
rpoZ XOO1148 RNA polymerase omega subunitchromosome CDS1170580 333 + 0.636637
salR XOO4418 sal operon transcriptional repressorchromosome CDS4703748 1329 - 0.648608
scoF XOO1870 cold shock proteinchromosome CDS1972238 228 + 0.596491
slyA XOO4601 transcriptional regulator for cryptic hemolysinchromosome CDS4905669 636 + 0.677673
smeR XOO4341 two-component system regulatory proteinchromosome CDS4619834 744 + 0.700269
soxR XOO1257 transcriptional regulator soxR familychromosome CDS1282972 447 + 0.659955
spoT XOO1149 pentaphosphate guanosine-3'-pyrophosphohydrolasechromosome CDS1171041 2172 + 0.635819
tcsR XOO4543 two-component system regulatory proteinchromosome CDS4841501 906 - 0.62362
tctD XOO1105 two-component system regulatory proteinchromosome CDS1130221 894 + 0.635347
tex XOO2225 transcription-related proteinchromosome CDS2337577 2361 + 0.646336
tlpC XOO2204 methyl-accepting chemotaxis proteinchromosome CDS2315875 1893 - 0.600634
trpI XOO3253 transcriptional regulatorchromosome CDS3490790 1017 + 0.668633
uidR XOO3449 transcriptional regulator uid familychromosome CDS3683542 657 + 0.645358
vacB XOO2080 RNase Rchromosome CDS2185145 2529 + 0.650059
vanR XOO3735 transcriptional regulator gntR familychromosome CDS3990118 210 + 0.657143
xylR XOO0169 xylose repressor-like proteinchromosome CDS170717 1185 - 0.66076
ybhD XOO1112 transcriptional regulatorchromosome CDS1136219 903 + 0.625692
ybhD XOO2201 transcriptional regulatorchromosome CDS2314108 207 + 0.676328
yoaA XOO1741 ATP-dependent helicasechromosome CDS1812068 2028 + 0.662229
yybA XOO1998 transcriptional regulator marR familychromosome CDS2105439 480 + 0.635417
 
Xylella fastidiosa 9a5c
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA XF1477 conserved hypothetical proteinchromosome CDS1422706 462 - 0.58658
NA XF2688 hypothetical proteinchromosome CDS2565485 966 - 0.544513
NA XF1752 transcriptional regulator (LysR family)chromosome CDS1670660 975 + 0.653333
NA XF0696 phage-related repressor proteinchromosome CDS661716 666 - 0.506006
NA XF2524 phage-related proteinchromosome CDS2396898 1593 + 0.557439
NA XF1354 transcriptional regulator (MarR family)chromosome CDS1301820 438 + 0.511416
NA XF1132 transcriptional regulator (LysR family)chromosome CDS1092886 906 - 0.558499
NA XF0704 phage-related proteinchromosome CDS664858 633 + 0.562401
NA XF0534 hypothetical proteinchromosome CDS527619 345 - 0.504348
NA XF0252 ATP-dependent RNA helicasechromosome CDS262848 1845 - 0.568022
NA XF2342 heat-inducible transcriptional repressorchromosome CDS2221578 1104 - 0.535326
NA XF1663 phage-related proteinchromosome CDS1599063 1146 + 0.541885
NA XF2228 transcriptional regulatorchromosome CDS2115745 567 - 0.550265
NA XF0744 conserved hypothetical proteinchromosome CDS698830 363 + 0.539945
NA XF2699 transcription termination factor Rhochromosome CDS2577722 1236 + 0.498382
NA XF1720 hypothetical proteinchromosome CDS1641630 375 + 0.544
NA XF0322 two-component system, regulatory proteinchromosome CDS338428 696 + 0.547414
NA XF1996 transcriptional regulator (PbsX family)chromosome CDS1910530 381 + 0.543307
NA XF2763 conserved hypothetical proteinchromosome CDS2655084 309 - 0.556634
NA XF2638 transcription antitermination factorchromosome CDS2523088 558 - 0.467742
NA XF1596 conserved hypothetical proteinchromosome CDS1540198 300 - 0.62
NA XF2633 RNA polymerase beta subunitchromosome CDS2515906 4167 - 0.467723
NA XF2246 ribonuclease IIIchromosome CDS2136468 639 + 0.546166
NA XF1176 RNA polymerase alpha subunitchromosome CDS1121803 999 + 0.445445
NA XF1719 hypothetical proteinchromosome CDS1640956 666 - 0.621622
NA XF2593 two-component system, regulatory proteinchromosome CDS2472975 801 - 0.518102
NA XF2491 conserved hypothetical proteinchromosome CDS2371871 402 + 0.524876
NA XF1987 VacB proteinchromosome CDS1899481 2154 - 0.565924
NA XF2071 conserved hypothetical proteinchromosome CDS1969289 243 - 0.596708
NA XF1786 phage-related proteinchromosome CDS1703470 222 - 0.617117
NA XF0389 two-component system, regulatory proteinchromosome CDS400823 684 + 0.497076
NA XF2239 RNA polymerase sigma-H factorchromosome CDS2130143 621 + 0.510467
NA XF1254 transcriptional regulator (AraC family)chromosome CDS1210758 843 + 0.563464
NA XF1350 RNA polymerase sigma-70 factorchromosome CDS1296789 1857 + 0.469036
NA XF0948 conserved hypothetical proteinchromosome CDS911484 546 + 0.547619
NA XF0684 phage-related proteinchromosome CDS655043 1512 - 0.55754
NA XF2110 hypothetical proteinchromosome CDS2006148 339 - 0.551622
NA XF1768 transcriptional regulator (LysR family)chromosome CDS1685230 942 + 0.674098
NA XF2085 transcriptional regulator (AcrR family)chromosome CDS1978950 618 - 0.506472
NA XF1730 transcriptional regulator (LysR family)chromosome CDS1650033 891 - 0.709315
NA XF1414 conserved hypothetical proteinchromosome CDS1363133 228 + 0.508772
NA XF0234 N utilization substance protein Achromosome CDS244362 1512 + 0.510582
NA XF2622 temperature acclimation protein Bchromosome CDS2500290 258 - 0.457364
NA XF0298 hypothetical proteinchromosome CDS315284 282 - 0.602837
NA XF1108 transcriptional elongation factorchromosome CDS1061812 465 + 0.513978
NA XF1316 ATP:GTP 3'-pyrophosphotranferasechromosome CDS1266639 2157 + 0.54242
NA XF2281 chromosome partitioning proteinchromosome CDS2170954 933 - 0.55627
NA XF2075 hypothetical proteinchromosome CDS1970472 279 - 0.577061
NA XF1502 RNA polymerase omega subunitchromosome CDS1453924 300 - 0.503333
NA XF2295 phage-related proteinchromosome CDS2181723 1413 + 0.584572
NA XF1998 DNA-binding proteinchromosome CDS1911707 273 + 0.505495
NA XF0629 hypothetical proteinchromosome CDS605696 711 - 0.535865
NA XF1630 conserved hypothetical proteinchromosome CDS1569505 1050 + 0.500952
NA XF1784 hypothetical proteinchromosome CDS1701566 762 - 0.658793
NA XF2352 cold shock proteinchromosome CDS2230084 204 - 0.480392
NA XF2153 conserved hypothetical proteinchromosome CDS2044119 780 - 0.537179
NA XF0354 ATP-dependent DNA helicasechromosome CDS360636 2157 + 0.565137
NA XF2452 conserved hypothetical proteinchromosome CDS2338597 984 + 0.530488
NA XF0278 hypothetical proteinchromosome CDS290340 660 + 0.557576
NA XF1920 Trp operon transcriptional repressorchromosome CDS1825482 279 - 0.344086
NA XF0882 ATP-dependent helicasechromosome CDS839676 2127 - 0.590973
NA XF2696 ATP-dependent RNA helicasechromosome CDS2574884 1635 - 0.519878
NA XF1721 hypothetical proteinchromosome CDS1642019 393 - 0.633588
NA XF2165 transcription-related proteinchromosome CDS2052376 2319 + 0.532557
NA XF0767 transcriptional regulator (ArsR family)chromosome CDS718907 345 - 0.553623
NA XF0833 transcriptional regulator (LysR family)chromosome CDS785942 1032 + 0.564922
NA XF0045 transcription-repair coupling factorchromosome CDS40005 3582 + 0.55081
NA XF2715 conserved hypothetical proteinchromosome CDS2603746 570 + 0.564912
NA XF2534 two-component system, regulatory proteinchromosome CDS2407544 678 + 0.542773
NA XF1463 transcriptional regulator (LacI family)chromosome CDS1408836 984 + 0.546748
NA XF2506 hypothetical proteinchromosome CDS2386432 1383 - 0.543745
NA XF2578 two-component system, regulatory proteinchromosome CDS2456679 579 + 0.557858
NA XF1113 two-component system, regulatory proteinchromosome CDS1068633 1161 + 0.529716
NA XF0192 ATP-dependent RNA helicasechromosome CDS201673 1341 + 0.522744
NA XF2758 hypothetical proteinchromosome CDS2646617 513 + 0.356725
NA XF0914 hypothetical proteinchromosome CDS880998 426 + 0.492958
NA XF0680 phage-related proteinchromosome CDS650674 1419 - 0.570825
NA XF0352 pentaphosphate guanosine-3'-pyrophosphohydrolasechromosome CDS357824 2208 + 0.517663
NA XF0122 LexA repressorchromosome CDS118513 672 + 0.517857
NA XF0462 hypothetical proteinchromosome CDS469587 222 + 0.540541
NA XF0216 transcriptional regulator (MarR family)chromosome CDS223451 507 + 0.433925
NA XF1532 oxidative stress transcriptional regulatorchromosome CDS1490224 978 + 0.525562
NA XF1626 two-component system, regulatory proteinchromosome CDS1566142 759 + 0.504611
NA XF1702 conserved hypothetical proteinchromosome CDS1624326 306 - 0.464052
NA XF2608 transcriptional regulator (LuxR/UhpA family)chromosome CDS2490561 663 - 0.464555
NA XF1928 hypothetical proteinchromosome CDS1832918 384 + 0.575521
NA XF1645 phage-related proteinchromosome CDS1587790 948 - 0.560127
NA XF2336 two-component system, regulatory proteinchromosome CDS2215260 726 - 0.530303
NA XF1795 conserved hypothetical proteinchromosome CDS1708386 729 - 0.515775
NA XF2127 phage-related proteinchromosome CDS2019346 1020 + 0.485294
NA XF1966 hypothetical proteinchromosome CDS1875227 2523 - 0.579469
NA XF0955 transcription termination factorchromosome CDS916359 474 + 0.531646
NA XF2511 phage-related proteinchromosome CDS2389733 771 + 0.496757
NA XF1710 hypothetical proteinchromosome CDS1630176 333 + 0.540541
NA XF1090 hypothetical proteinchromosome CDS1045600 411 - 0.46472
NA XF1013 conserved hypothetical proteinchromosome CDS973480 483 - 0.571429
NA XF1658 phage-related repressor proteinchromosome CDS1596393 696 - 0.441092
NA XF2038 transcriptional regulatorchromosome CDS1941263 651 - 0.596006
NA XF1722 hypothetical proteinchromosome CDS1642422 393 - 0.610687
NA XF0044 hypothetical proteinchromosome CDS39398 540 + 0.542593
NA XF2041 hypothetical proteinchromosome CDS1943886 762 - 0.519685
NA XF0240 conserved hypothetical proteinchromosome CDS252969 429 - 0.519814
NA XF2691 RNA polymerase sigma-32 factorchromosome CDS2570566 882 - 0.477324
NA XF1617 hypothetical proteinchromosome CDS1556498 930 - 0.565591
NA XF0972 transcriptional regulator (LuxR/UhpA family)chromosome CDS928656 633 + 0.521327
NA XF2632 RNA polymerase beta' subunitchromosome CDS2511584 4293 - 0.467738
NA XF1490 transcriptional regulator (MarR/EmrR family)chromosome CDS1438362 480 - 0.472917
NA XF1408 RNA polymerase sigma-54 factorchromosome CDS1358278 1389 - 0.535637
NA XF2528 phage-related proteinchromosome CDS2401429 1419 + 0.570825
NA XF0061 transcriptional repressorchromosome CDS55178 1080 - 0.447222
XFa0001 transcriptional regulatorpXF51 CDS41 261 + 0.417625
XFa0025 conserved hypothetical proteinpXF51 CDS20735 486 + 0.522634
XFa0046 hypothetical proteinpXF51 CDS36725 327 + 0.446483
XFa0059 plasmid replication/partition proteinpXF51 CDS45706 1206 - 0.529851
 
Xylella fastidiosa Temecula1, Temecula1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PD_0682 transcriptional regulator LacI familychromosome CDS836237 1077 + 0.545033
NA PD_1002 phage-related proteinchromosome CDS1204485 633 - 0.540284
NA PD_1177 conserved hypothetical proteinchromosome CDS1379817 306 + 0.464052
NA PD_0694 conserved hypothetical proteinchromosome CDS850435 462 - 0.588745
NA PD_1159 transcriptional regulatorchromosome CDS1360302 930 + 0.56129
NA PD_0871 Trp operon transcriptional repressorchromosome CDS1083467 279 + 0.34767
NA PD_1016 phage-related proteinchromosome CDS1215224 885 + 0.542373
NA PD_0032 conserved hypothetical proteinchromosome CDS39197 543 + 0.535912
NA PD_1116 phage-related proteinchromosome CDS1312844 567 - 0.560847
NA PD_0813 transcriptional regulator PbsX familychromosome CDS1000347 381 - 0.540682
NA PD_1939 N-acetyltransferasechromosome CDS2279145 471 - 0.573248
NA PD_1149 transcriptional regulatorchromosome CDS1347095 1005 - 0.499502
NA PD_1133 phage-related proteinchromosome CDS1324106 1608 + 0.555348
NA PD_1993 temperature acclimation protein Bchromosome CDS2344635 222 - 0.454955
NA PD_1124 phage-related proteinchromosome CDS1317122 759 + 0.516469
NA PD_1748 conserved hypothetical proteinchromosome CDS2035131 534 - 0.533708
NA PD_0371 phage-related proteinchromosome CDS458554 402 + 0.529851
NA PD_2104 conserved hypothetical proteinchromosome CDS2491945 309 - 0.527508
NA PD_0906 phage-related proteinchromosome CDS1117952 435 - 0.411494
NA PD_0307 toxinchromosome CDS386446 483 - 0.565217
NA PD_2046 conserved hypothetical proteinchromosome CDS2409891 966 - 0.534162
NA PD_1470 conserved hypothetical proteinchromosome CDS1713534 744 + 0.514785
NA PD_1528 conserved hypothetical proteinchromosome CDS1773249 705 + 0.540426
NA PD_0835 conserved hypothetical proteinchromosome CDS1033883 2523 + 0.571145
NA PD_0993 conserved hypothetical proteinchromosome CDS1197942 360 - 0.516667
NA PD_0389 conserved hypothetical proteinchromosome CDS472994 429 - 0.456876
NA PD_1001 phage-related proteinchromosome CDS1203700 789 - 0.555133
NA PD_1730 phage-related proteinchromosome CDS2017510 1419 + 0.566596
NA PD_1213 KDO kinasechromosome CDS1414311 780 - 0.532051
NA PD_2093 conserved hypothetical proteinchromosome CDS2481568 513 + 0.362573
NA PD_1726 phage-related proteinchromosome CDS2013171 1512 + 0.552249
NA PD_1380 cold shock proteinchromosome CDS1603976 204 - 0.465686
NA PD_1315 chromosome partitioning proteinchromosome CDS1542769 933 - 0.543408
NA PD_0707 transcriptional regulator MarR/EmrR familychromosome CDS866104 480 - 0.466667
NA PD_1137 phage-related proteinchromosome CDS1328703 1419 + 0.561663
NA PD_1087 conserved hypothetical proteinchromosome CDS1288023 333 - 0.537538
NA PD_1194 phage-related proteinchromosome CDS1389925 1419 + 0.568006
NA PD_0989 phage-related proteinchromosome CDS1194458 243 - 0.584362
NA PD_0643 conserved hypothetical proteinchromosome CDS790372 228 + 0.517544
NA PD_1909 transcription regulator proteinchromosome CDS2239693 363 - 0.53168
NA PD_1321 phage-related proteinchromosome CDS1550281 168 - 0.511905
NA PD_0382 phage-related proteinchromosome CDS464933 1419 + 0.568006
NA PD_0199 conserved hypothetical proteinchromosome CDS251341 429 - 0.517483
NA PD_0954 conserved hypothetical proteinchromosome CDS1157184 333 - 0.51952
NA PD_0225 conserved hypothetical proteinchromosome CDS288771 660 + 0.557576
NA PD_1005 phage-related repressor proteinchromosome CDS1206621 690 + 0.442029
NA PD_1771 conserved hypothetical proteinchromosome CDS2063510 426 - 0.50939
act PD_0421 transcriptional regulatorchromosome CDS520298 906 - 0.558499
actR PD_1958 two-component system, regulatory proteinchromosome CDS2300547 579 + 0.571675
agmR PD_0268 transcriptional regulator LuxR/UhpA familychromosome CDS340538 633 + 0.516588
algH PD_1276 transcriptional regulatorchromosome CDS1487577 567 - 0.552028
algR PD_1153 two-component system, regulatory proteinchromosome CDS1350700 759 - 0.498024
algU PD_1284 RNA polymerase sigma-H factorchromosome CDS1502037 621 + 0.507246
attO PD_0520 transcriptional regulator AraC familychromosome CDS636886 846 + 0.553191
baf PD_1072 transcriptional regulatorchromosome CDS1274398 729 + 0.510288
colR PD_1919 two-component system, regulatory proteinchromosome CDS2251333 678 + 0.536873
colR PD_1367 two-component system, regulatory proteinchromosome CDS1589173 714 - 0.529412
cysB PD_1839 transcriptional regulator LysR familychromosome CDS2154703 984 - 0.557927
deaD PD_0205 ATP-dependent RNA helicasechromosome CDS261295 1848 - 0.570887
fis PD_0811 DNA-binding proteinchromosome CDS999260 273 - 0.512821
gacA PD_1984 transcriptional regulatorchromosome CDS2334631 663 - 0.463047
greA PD_0400 transcriptional elongation factorchromosome CDS489158 477 + 0.522013
hlyU PD_1891 transcriptional regulator ArsR familychromosome CDS2219431 345 + 0.536232
hrcA PD_1372 heat-inducible transcriptional repressorchromosome CDS1595494 1050 - 0.542857
korB PD_0041 transcriptional repressorchromosome CDS54701 1074 - 0.439479
lexA PD_0092 LexA repressorchromosome CDS117015 636 + 0.525157
mfd PD_0033 transcription-repair coupling factorchromosome CDS39807 3588 + 0.544314
nusA PD_0193 N utilization substance protein Achromosome CDS242734 1512 + 0.509921
nusB PD_1743 transcription termination factorchromosome CDS2030328 474 - 0.525316
nusG PD_2006 transcription antitermination factorchromosome CDS2367393 558 - 0.460573
oxyR PD_0747 oxidative stress transcriptional regulatorchromosome CDS921694 936 + 0.522436
phoB PD_1970 two-component system, regulatory proteinchromosome CDS2317096 696 - 0.530172
popP PD_1679 two-component system, regulatory proteinchromosome CDS1948635 684 - 0.489766
prsX PD_0175 transcriptional regulator MarR familychromosome CDS222185 507 + 0.433925
recG PD_1705 ATP-dependent DNA helicasechromosome CDS1987389 2157 - 0.562819
relA PD_0563 ATP:GTP 3'-pyrophosphotranferasechromosome CDS692427 2157 + 0.538711
rhlB PD_2053 ATP-dependent RNA helicasechromosome CDS2419308 1632 - 0.515319
rhlE PD_0157 ATP-dependent RNA helicasechromosome CDS200530 1341 + 0.515287
rho PD_2055 transcription termination factor Rhochromosome CDS2422113 1281 + 0.494145
rnc PD_1290 ribonuclease IIIchromosome CDS1508311 684 + 0.55117
rpfG PD_0405 response regulatorchromosome CDS496004 1155 + 0.522944
rpoA PD_0461 RNA polymerase, alpha subunitchromosome CDS549106 999 + 0.439439
rpoB PD_2001 RNA polymerase beta subunitchromosome CDS2360203 4167 - 0.465803
rpoC PD_2000 RNA polymerase beta' subunitchromosome CDS2355881 4224 - 0.464489
rpoD PD_0593 RNA polymerase sigma-70 factorchromosome CDS724988 1872 + 0.47062
rpoH PD_2048 RNA polymerase sigma-32 factorchromosome CDS2414998 882 - 0.471655
rpoN PD_0637 RNA polymerase sigma-54 factorchromosome CDS785517 1389 - 0.532757
rpoZ PD_0719 RNA polymerase omega subunitchromosome CDS883270 300 - 0.506667
spoT PD_1707 pentaphosphate guanosine-3'-pyrophosphohydrolasechromosome CDS1990140 2208 - 0.513587
tctD PD_0265 two-component system, regulatory proteinchromosome CDS336890 696 + 0.531609
tex PD_1223 transcription-related proteinchromosome CDS1422685 2319 + 0.531263
vacB PD_0820 truncated ribonuclease Rchromosome CDS1009582 2247 + 0.564308
yoaA PD_1798 ATP-dependent helicasechromosome CDS2099787 2022 + 0.586548
yybA PD_0595 transcriptional regulator MarR familychromosome CDS730012 447 + 0.496644