XGB - The Xanthomonas Genome Browser - Gene list

Title

+ Xanthomonas axonopodis pv. citri str. 306, 306

+ Xanthomonas campestris pv. campestris str. 8004, 8004

+ Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913

+ Xanthomonas campestris pv. vesicatoria str. 85-10, 85-10

+ Xanthomonas oryzae pv. oryzae KACC10331, KACC10331

+ Xylella fastidiosa 9a5c

+ Xylella fastidiosa Temecula1, Temecula1

+ Xylella fastidiosa, ATTC 35868

+ COG functional categories

+ (Clickable) linear whole genome views

+ Horizontal gene transfer (predicted by SIGI-HMM)

+ Sequence retrieval

+ Advanced search

+ Sequence similarity search

+ Best bidirectional hits (protein-based analysis)

+ Gene core sets (protein-based analysis)

+ Gene partnerships (DNA-based analysis)

+ Protein variations (protein-based analysis)

+ Synteny analysis (protein-based analysis)

+ Gene conservation (protein-based analysis)

+ Codon and amino acid usages (DNA- and protein-based analysis)

Gene list

Applied filters:

COG category: RNA processing and modification

Number of genes found: 7

Free access


Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View in Fasta format (Protein)

Xanthomonas axonopodis pv. citri str. 306, 306

Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
orn		oligoribonuclease	chromosome	CDS	2383251	585	+	0.617094

Xanthomonas campestris pv. campestris str. 8004, 8004
Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	XC_1950	oligoribonuclease	chromosome	CDS	2353827	585	+	0.637607

Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913
Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
orn		oligoribonuclease	chromosome	CDS	2556895	585	-	0.637607

Xanthomonas campestris pv. vesicatoria str. 85-10, 85-10
Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
orn	XCV2200	oligoribonuclease	chromosome	CDS	2529360	585	+	0.625641

Xanthomonas oryzae pv. oryzae KACC10331, KACC10331
Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
orn	XOO2209	oligoribonuclease	chromosome	CDS	2320590	585	+	0.605128

Xylella fastidiosa 9a5c
Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
NA	XF1257	oligoribonuclease	chromosome	CDS	1212489	582	+	0.508591

Xylella fastidiosa Temecula1, Temecula1
Name	Locus tag	Product / Description	Genomic element	Type	Begin	Length	Strand	GC-content
orn	PD_0522	oligoribonuclease	chromosome	CDS	638680	582	+	0.496564